RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 TNFAIP2Q03169 654 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 POTEDQ86YR6 584 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 SPATA33Q96N06 139 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 PURBQ96QR8 312 aaKnown RBP12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 GZF1Q9H116 711 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 SAGE1Q9NXZ1 904 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 FAM47CQ5HY64 1035 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 SPECC1Q5M775 1068 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 CABP7Q86V35 215 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 ATP6V0A1Q93050 837 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 TRPC6Q9Y210 931 aa12.51□□□□□ -0.41
TNFAIP3-201ENST00000237289 ECM29Q5VYK3 1845 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 GH1P01241 217 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 PSAPP07602 524 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 ARL6IP4Q66PJ3 421 aaKnown RBP12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 IQUBQ8NA54 791 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 VTA1Q9NP79 307 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 KCNH7Q9NS40 1196 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 PRKCZQ05513 592 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 DHX58Q96C10 678 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 NT5C3AQ9H0P0 336 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 DNM3Q9UQ16 869 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 JAK3P52333 1124 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 CYFIP1Q7L576 1253 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 FTOQ9C0B1 505 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 JADE2Q9NQC1 790 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 NRBP2Q9NSY0 501 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 SRRDQ9UH36 339 aa12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 ZNF215Q9UL58 517 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-201ENST00000237289 C6orf222P0C671 652 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 IDEP14735 1019 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 CYP4A11Q02928 519 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 ACVR2BQ13705 512 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 KANK3Q6NY19 840 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 VSIG10LQ86VR7 867 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 REPS2Q8NFH8 660 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 JPH1Q9HDC5 661 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 SLC9A2Q9UBY0 812 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 WDR64B1ANS9 1081 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 MOXD1Q6UVY6 613 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 LINC00301Q8NCQ3 95 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 AK8Q96MA6 479 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 DIS3Q9Y2L1 958 aaKnown RBP12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 KDM3AQ9Y4C1 1321 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 ARHGEF35A5YM69 484 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 TBX3O15119 743 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 SMC2O95347 1197 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 MYL3P08590 195 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 TGFB3P10600 412 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 TNMDQ9H2S6 317 aa12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-201ENST00000237289 PPP6R2O75170 966 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 MOGSQ13724 837 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 NFKBIBQ15653 356 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 PDXDC2PQ6P474 469 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 CNMDO75829 334 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 SFNP31947 248 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 GRK4P32298 578 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 LAMC2Q13753 1193 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 GOLGB1Q14789 3259 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 LOC102724159A0A0B4J2E5 919 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 TBCAO75347 108 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 CLSTN1O94985 981 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 AKR1A1P14550 325 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 PWP2Q15269 919 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 TPD52L1Q16890 204 aaPredicted RBP12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 MSL3Q8N5Y2 521 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 MAML3Q96JK9 1138 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 DISC1Q9NRI5 854 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 HSPA1AP0DMV8 641 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 HSPA1BP0DMV9 641 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 GRB14Q14449 540 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 ADALQ6DHV7 355 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 FAM133AQ8N9E0 248 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 CLIC6Q96NY7 704 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 KCNH3Q9ULD8 1083 aa12.48□□□□□ -0.41
TNFAIP3-201ENST00000237289 HMGCRP04035 888 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 ELNP15502 786 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 IQSEC1Q6DN90 963 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 SV2BQ7L1I2 683 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 SLAIN1Q8ND83 568 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 ANP32BQ92688 251 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 RIT2Q99578 217 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 DOCK1Q14185 1865 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 DEKP35659 375 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 SEPT1Q8WYJ6 367 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 CSRNP2Q9H175 543 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 RCOR1Q9UKL0 485 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 PCDHA7Q9UN72 937 aa12.47□□□□□ -0.41
TNFAIP3-201ENST00000237289 PCDHA10Q9Y5I2 948 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms