RNA–Protein interactions for RNA: ENSMUST00000197407.4

Nub1-202, Transcript of NEDD8 ultimate buster 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nub1, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1-202ENSMUST00000197407 Nlrp4eQ66X19 978 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 TwistnbQ78WZ7 330 aaKnown RBP13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Gpr139Q80UC8 345 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Slfnl1Q8BHW9 410 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Parp10Q8CIE4 960 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Coq6Q8R1S0 476 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Gpr108Q91WD0 569 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Prpf4Q9DAW6 521 aaKnown RBP13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Foxo3Q9WVH4 672 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Slit2Q9R1B9 1521 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Tcp10bE9PYJ0 438 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Stmn4P63042 189 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Aggf1Q7TN31 711 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Sptlc3Q8BG54 563 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Tmem143Q8VD26 458 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Ube2sQ921J4 223 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Ccne2Q9Z238 404 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Gjc1P28229 396 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Cops2P61202 443 aaKnown RBP13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 HelqQ2VPA6 1069 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Nlrp2Q4PLS0 1046 aaKnown RBP13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Nlrp9aQ66X03 949 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Chmp2bQ8BJF9 213 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Abcf3Q8K268 709 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Fgd4Q91ZT5 766 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Tmem191cQ9JJB1 302 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Hdac6Q9Z2V5 1149 aa13.8□□□□□ -0.2
Nub1-202ENSMUST00000197407 Tet3Q8BG87 1668 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Gm1141B9EJU1 475 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Lrrfip1Q3UZ39 729 aaKnown RBP13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Garnl3Q3V0G7 1038 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Tpp2Q64514 1262 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Asap2Q7SIG6 958 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Rassf9Q8K342 435 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Rab27aQ9ERI2 221 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Trappc11B2RXC1 1133 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Parp1P11103 1013 aaKnown RBP13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Alox15P39654 663 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Drp2Q05AA6 957 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Ssrp1Q08943 708 aaKnown RBP13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Ccdc127Q3TC33 260 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Cyp4x1Q6A152 507 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Tarsl2Q8BLY2 790 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Proser2Q8C5R2 471 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 4921504E06RikQ8CET2 560 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Fkbp6Q91XW8 327 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Bag2Q91YN9 210 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Senp2Q91ZX6 588 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Etnk1Q9D4V0 363 aa13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Mrps9Q9D7N3 390 aaKnown RBP13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Eef1gQ9D8N0 437 aaKnown RBP13.79□□□□□ -0.2
Nub1-202ENSMUST00000197407 Med23Q80YQ2 1367 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Gm5936A2BG95 728 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Gm5640A3KG49 728 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Cfap70D3YVL2 1141 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Nr1i2O54915 431 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 MarcksP26645 309 aaKnown RBP13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 KaznQ69ZS8 779 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Rcan1Q9JHG6 198 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Znf536Q8K083 1302 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Pde6bP23440 856 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Cnnm2Q3TWN3 875 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Usp38Q8BW70 1042 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Fam228aQ8CDW1 299 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Efhd1Q9D4J1 240 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Suclg2Q9Z2I8 433 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Card9A2AIV8 536 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Sclt1G5E861 688 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Flot1O08917 428 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Oprl1P35377 367 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Ephb2P54763 986 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Pabpn1lQ5XFR0 273 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Acap3Q6NXL5 833 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Ccdc25Q78PG9 208 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 NcaldQ91X97 193 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Sgpp1Q9JI99 430 aa13.78□□□□□ -0.2
Nub1-202ENSMUST00000197407 Gm7347D3YYI9 267 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Stag2O35638 1231 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 ProcP33587 460 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Asap3Q5U464 904 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Dr1Q91WV0 176 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Grin3bQ91ZU9 1003 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Emilin1Q99K41 1017 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 HgsQ99LI8 775 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Spc24Q9D083 201 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Spata17Q9D552 379 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Ror2Q9Z138 944 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 RictorQ6QI06 1708 aa13.77□□□□□ -0.2
Nub1-202ENSMUST00000197407 Naaladl2A0A0N4SUJ3 795 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Zfp213E9QAW0 468 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Ap1m1P35585 423 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Taok1Q5F2E8 1001 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Xlr3cQ61806 226 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Atg9aQ68FE2 551 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Hdac4Q6NZM9 1076 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Rbm26Q6NZN0 1012 aaKnown RBP13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Fam160b2Q80YR2 744 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Noc2lQ9WV70 747 aaKnown RBP13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Lama4P97927 1816 aa13.77□□□□□ -0.21
Nub1-202ENSMUST00000197407 Gm3415J3QMS8 315 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms