RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Nf2P46662 596 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Hdhd2Q3UGR5 259 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 SlmapQ3URD3 845 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ift20Q61025 132 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ces1eQ64176 562 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 GartQ64737 1010 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Krt42Q6IFX2 452 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Rhbdf1Q6PIX5 856 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ankrd13aQ80UP5 588 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ccdc181Q80ZU5 509 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Rab11fip4Q8BQP8 635 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Kif17Q99PW8 1038 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Trap1Q9CQN1 706 aaKnown RBP14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Skap2Q3UND0 358 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Glra4Q61603 456 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 March6Q6ZQ89 909 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Srrm3Q80WV7 648 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Def6Q8C2K1 630 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Jag1Q9QXX0 1218 aa14.23□□□□□ -0.13
Nup88-203ENSMUST00000108531 Qtrt2B8ZXI1 415 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Apol10bG3X9K7 334 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Rfpl4bJ3QPR6 266 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Eif6O55135 245 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Bend4P86174 541 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Mcl1P97287 331 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Rnf207Q3V3A7 635 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Rasa3Q60790 834 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Sycp1Q62209 993 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Pak2Q8CIN4 524 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 P3h4Q8K2B0 443 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Olfr805Q8VFI4 319 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Msantd4Q91YU3 345 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Xrcc4Q924T3 326 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 LrmdaQ9D9B4 229 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 CoasyQ9DBL7 563 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Tmem191cQ9JJB1 302 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Tex21Q9R0U9 575 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Prpf40aQ9R1C7 953 aaKnown RBP14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Klra10Q9R1G6 266 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Klrc1Q9Z202 244 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Flt1P35969 1333 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Akr1b10G5E895 316 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Epb41l4aP52963 686 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Zmym1Q3TJB1 983 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Klra4Q60651 263 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Krt74Q6IFZ9 495 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Fnbp1Q80TY0 616 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Slc51bQ80WK2 128 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Micall1Q8BGT6 870 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 GanQ8CA72 597 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Parp10Q8CIE4 960 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 ParnQ8VDG3 624 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Cul5Q9D5V5 780 aa14.22□□□□□ -0.13
Nup88-203ENSMUST00000108531 Sec24cG3X972 1096 aaKnown RBP14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Akr1b1P45376 316 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Tcerg1lQ3B807 590 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Nr1d1Q3UV55 615 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Oxr1Q4KMM3 866 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Islr2Q5RKR3 745 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Naa15Q80UM3 865 aaKnown RBP14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Dpp8Q80YA7 892 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Tesk2Q8VCT9 570 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 RnmtQ9D0L8 465 aaKnown RBP14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Erp44Q9D1Q6 406 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Scgb2b12S4R2L0 112 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Btbd18A0A0A6YY25 723 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Vmn2r79E9Q067 851 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 C2cd2E9Q3C1 696 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Nedd4P46935 887 aaKnown RBP14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Hsd17b1P51656 344 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Nsun7Q14AW5 724 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Acsbg2Q2XU92 667 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Stxbp3Q60770 592 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Ccpg1Q640L3 753 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Dusp19Q8K4T5 220 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Sgms1Q8VCQ6 419 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Alg1Q921Q3 482 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Smc6Q924W5 1097 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Asic2Q925H0 512 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Saal1Q9D2C2 474 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Trim10Q9WUH5 489 aa14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Tjp2Q9Z0U1 1167 aaKnown RBP14.21□□□□□ -0.13
Nup88-203ENSMUST00000108531 Adgrf5G5E8Q8 1348 aa14.21□□□□□ -0.14
Nup88-203ENSMUST00000108531 Orc4O88708 433 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Cd44P15379 778 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Ighmbp2P40694 993 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Acbd5Q5XG73 508 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Haus6Q6NV99 933 aaKnown RBP14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Zbtb39Q6PDK0 712 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Tlr11Q6R5P0 926 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Krt9Q6RHW0 743 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Olfr832Q7TRG9 312 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Fam193aQ8CGI1 1231 aaKnown RBP14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Creb3l3Q91XE9 479 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Ube2sQ921J4 223 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Lpin2Q99PI5 893 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Mzb1Q9D8I1 188 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Mxra8Q9DBV4 442 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Nap1l5Q9JJF0 156 aa14.2□□□□□ -0.14
Nup88-203ENSMUST00000108531 Nfu1Q9QZ23 255 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms