RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	LAG2	Q92325	660 aa		14.89	□□□□□ -0.03
CCC1	YLR220W	TY2A-DR3	Q99303	438 aa		14.89	□□□□□ -0.03
CCC1	YLR220W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	14.88	□□□□□ -0.03	not detected
CCC1	YLR220W	ATO2	P32907	282 aa		14.88	□□□□□ -0.03
CCC1	YLR220W	YHR112C	P38716	378 aa		14.88	□□□□□ -0.03
CCC1	YLR220W	TRM5	P38793	499 aa		14.88	□□□□□ -0.03
CCC1	YLR220W	IMA5	P40884	581 aa		14.88	□□□□□ -0.03
CCC1	YLR220W	MAD2	P40958	196 aa		14.88	□□□□□ -0.03
CCC1	YLR220W	FHN1	P53279	174 aa		14.88	□□□□□ -0.03
CCC1	YLR220W	RRN11	Q04712	507 aa		14.88	□□□□□ -0.03
CCC1	YLR220W	PSR1	Q07800	427 aa		14.88	□□□□□ -0.03
CCC1	YLR220W	RAP1	P11938	827 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	CSM1	P25651	190 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	CWP1	P28319	239 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	CDC5	P32562	705 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	SSE1	P32589	693 aa	Known RBP	14.87	□□□□□ -0.03
CCC1	YLR220W	SFA1	P32771	386 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	SPO23	P33757	523 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	VPS21	P36017	210 aa	Known RBP	14.87	□□□□□ -0.03
CCC1	YLR220W	MMT1	Q03218	510 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	GGA1	Q06336	557 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	BMT6	Q12291	365 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	YOL087C	Q99247	1116 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	Q0010	Q9ZZX9	128 aa		14.87	□□□□□ -0.03
CCC1	YLR220W	YPR096C	O13587	100 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	MST1	P07236	462 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	PWP1	P21304	576 aa	Known RBP	14.86	□□□□□ -0.03
CCC1	YLR220W	HES1	P35843	434 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	IST2	P38250	946 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	COS111	P38308	924 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	SEC26	P41810	973 aa	Known RBP	14.86	□□□□□ -0.03
CCC1	YLR220W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	14.86	□□□□□ -0.03	not detected
CCC1	YLR220W	DYN3	Q04949	312 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	YLR456W	Q06199	204 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	XYL2	Q07993	356 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	IRC13	Q08630	104 aa		14.86	□□□□□ -0.03
CCC1	YLR220W	LEU9	Q12166	604 aa	Known RBP	14.86	□□□□□ -0.03
CCC1	YLR220W	ACC1	Q00955	2233 aa	Known RBP	14.85	□□□□□ -0.03
CCC1	YLR220W	KAR1	P11927	433 aa		14.85	□□□□□ -0.03
CCC1	YLR220W	GCD2	P12754	651 aa	Predicted RBP	14.85	□□□□□ -0.03
CCC1	YLR220W	PRI2	P20457	528 aa		14.85	□□□□□ -0.03
CCC1	YLR220W	CCA1	P21269	546 aa		14.85	□□□□□ -0.03
CCC1	YLR220W	GAB1	P41733	394 aa		14.85	□□□□□ -0.03
CCC1	YLR220W	FMP32	P43557	207 aa		14.85	□□□□□ -0.03
CCC1	YLR220W	ESF2	P53743	316 aa	Known RBP	14.85	□□□□□ -0.03
CCC1	YLR220W	HSP31	Q04432	237 aa		14.85	□□□□□ -0.03
CCC1	YLR220W	VPS74	Q06385	345 aa		14.85	□□□□□ -0.03
CCC1	YLR220W	SKM1	Q12469	655 aa		14.85	□□□□□ -0.03
CCC1	YLR220W	RAS2	P01120	322 aa	Known RBP	14.84	□□□□□ -0.03
CCC1	YLR220W	TPK2	P06245	380 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	ZIP1	P31111	875 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	MRPL17	P36528	281 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	ASC1	P38011	319 aa	Known RBP	14.84	□□□□□ -0.03
CCC1	YLR220W	ROT2	P38138	954 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	HPM1	P40481	377 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	PSA1	P41940	361 aa	Known RBP	14.84	□□□□□ -0.03
CCC1	YLR220W	PRM10	P42946	383 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	BIO3	P50277	480 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	SDT1	P53078	280 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	GOR1	P53839	350 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	YDR476C	Q03362	224 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	SWF1	Q04629	336 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	YHC1	Q05900	231 aa	Known RBP	14.84	□□□□□ -0.03
CCC1	YLR220W	GYP1	Q08484	637 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	GET4	Q12125	312 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	RUP1	Q12242	671 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	YVC1	Q12324	675 aa		14.84	□□□□□ -0.03
CCC1	YLR220W	TOP3	P13099	656 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	SAN1	P22470	610 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	AGP1	P25376	633 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	ERG1	P32476	496 aa	Known RBP	14.83	□□□□□ -0.04
CCC1	YLR220W	PET127	P32606	800 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	ALG5	P40350	334 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	MUP1	P50276	574 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	NRM1	P53718	249 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	RRP45	Q05636	305 aa	Known RBP	14.83	□□□□□ -0.04
CCC1	YLR220W	REX4	Q08237	289 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	PUS9	Q12069	462 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	TY4A-H	Q6Q5P6	413 aa		14.83	□□□□□ -0.04
CCC1	YLR220W	ATP2	P00830	511 aa	Known RBP	14.82	□□□□□ -0.04
CCC1	YLR220W	SYP1	P25623	870 aa	Known RBP	14.82	□□□□□ -0.04
CCC1	YLR220W	HOG1	P32485	435 aa		14.82	□□□□□ -0.04
CCC1	YLR220W	BEM4	P39011	633 aa		14.82	□□□□□ -0.04
CCC1	YLR220W	RIM21	P48565	533 aa		14.82	□□□□□ -0.04
CCC1	YLR220W	RPN5	Q12250	445 aa	Known RBP	14.82	□□□□□ -0.04
CCC1	YLR220W	CSF1	Q12150	2958 aa		14.82	□□□□□ -0.04
CCC1	YLR220W	RPS17A	P02407	136 aa	Known RBP	14.81	□□□□□ -0.04
CCC1	YLR220W	RPS17B	P14127	136 aa	Known RBP	14.81	□□□□□ -0.04
CCC1	YLR220W	NTH1	P32356	751 aa		14.81	□□□□□ -0.04
CCC1	YLR220W	FAA3	P39002	694 aa		14.81	□□□□□ -0.04
CCC1	YLR220W	DIC1	Q06143	298 aa		14.81	□□□□□ -0.04
CCC1	YLR220W	BCP1	Q06338	283 aa		14.81	□□□□□ -0.04
CCC1	YLR220W	YLR030W	Q07967	263 aa		14.81	□□□□□ -0.04
CCC1	YLR220W	YOL131W	Q08270	108 aa		14.81	□□□□□ -0.04
CCC1	YLR220W	RRP40	Q08285	240 aa	Known RBP	14.81	□□□□□ -0.04
CCC1	YLR220W	NTO1	Q12311	748 aa		14.81	□□□□□ -0.04
CCC1	YLR220W	MSS116	P15424	664 aa	Known RBP	14.8	□□□□□ -0.04
CCC1	YLR220W	MEF1	P25039	761 aa		14.8	□□□□□ -0.04
CCC1	YLR220W	PRO1	P32264	428 aa		14.8	□□□□□ -0.04
CCC1	YLR220W	APT2	P36973	181 aa		14.8	□□□□□ -0.04

Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms