RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	GPM1	P00950	247 aa	Known RBP	4.56	□□□□□ -1.68
PAN1	YIR006C	SIS1	P25294	352 aa	Known RBP	4.56	□□□□□ -1.68
PAN1	YIR006C	HBS1	P32769	611 aa	Known RBP	4.56	□□□□□ -1.68
PAN1	YIR006C	YBL010C	P32788	280 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	TSA1	P34760	196 aa	Known RBP	4.56	□□□□□ -1.68
PAN1	YIR006C	RSM22	P36056	628 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	ANR2	P36090	516 aa	Predicted RBP	4.56	□□□□□ -1.68
PAN1	YIR006C	CTF8	P38877	133 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	HPA3	P39979	161 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	AVT6	P40074	448 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	MMF1	P40185	145 aa	Known RBP	4.56	□□□□□ -1.68
PAN1	YIR006C	MET12	P46151	657 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	AIM25	P47140	327 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	ROM1	P53046	1155 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	IMA1	P53051	589 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	SHY1	P53266	389 aa		4.56	□□□□□ -1.68
PAN1	YIR006C	MRP13	P12686	339 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	CDC42	P19073	191 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	YAP1	P19880	650 aa	Known RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	IFM1	P25038	676 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	IDH2	P28241	369 aa	Known RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	ATP11	P32453	318 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	KAP122	P32767	1081 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	YBR053C	P38235	358 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	MGE1	P38523	228 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	SER3	P40054	469 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	BTT1	P40314	149 aa	Predicted RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	RFC4	P40339	323 aa	Known RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	SER33	P40510	469 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	MAD2	P40958	196 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	YJR154W	P47181	346 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	GNP1	P48813	663 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	MNT4	P53745	580 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	YNR065C	P53751	1116 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	RQC1	Q05468	723 aa	Known RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	YCL012C	Q8J0M4	134 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	PDA1	P16387	420 aa	Known RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	PUP1	P25043	261 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	PAH1	P32567	862 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	IST2	P38250	946 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	KSP1	P38691	1029 aa	Known RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	YHR202W	P38887	602 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	MXR1	P40029	184 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	IME4	P41833	600 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	YJR124C	P47159	448 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	BUD17	P53727	317 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	SNX41	Q04053	625 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	BER1	Q06688	274 aa	Known RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	FMP45	Q07651	309 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	BUD7	Q08754	746 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	TIF6	Q12522	245 aa	Known RBP	4.55	□□□□□ -1.68
PAN1	YIR006C	RAD10	P06838	210 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	GDA1	P32621	518 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	RCK1	P38622	512 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	ULI1	P43604	169 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	RAD30	Q04049	632 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	EAF1	Q06337	982 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	YLR126C	Q12288	251 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	GPR1	Q12361	961 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	SKS1	Q12505	502 aa		4.55	□□□□□ -1.68
PAN1	YIR006C	RAD52	P06778	471 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	MNE1	P24720	663 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	RSC6	P25632	483 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	BEM3	P32873	1128 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	SEC61	P32915	480 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	JEN1	P36035	616 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	INM1	P38710	295 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	PCL5	P38794	229 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	PHB1	P40961	287 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	LSC1	P53598	329 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	SIZ1	Q04195	904 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	COA4	Q05809	96 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	YCR015C	P25616	317 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	PET309	P32522	965 aa	Predicted RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	SRP101	P32916	621 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	YGR054W	P53235	642 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	BRE5	P53741	515 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	COS1	P53822	381 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	STE2	D6VTK4	431 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	DBR1	P24309	405 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	LYP1	P32487	611 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	STE5	P32917	917 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	FLR1	P38124	548 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	HAM1	P47119	197 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	MET14	Q02196	202 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	ABZ2	Q03266	374 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	RBS1	Q05672	457 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	WHI4	Q07655	649 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	YPL245W	Q12179	454 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	TSC13	Q99190	310 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	SAM35	P14693	329 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	ARF2	P19146	181 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	RNA14	P25298	677 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	ASH1	P34233	588 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	YPT52	P36018	234 aa	Known RBP	4.54	□□□□□ -1.68
PAN1	YIR006C	NAT2	P37293	288 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	YPK3	P38070	525 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	EHT1	P38295	451 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	LNP1	P38878	278 aa		4.54	□□□□□ -1.68
PAN1	YIR006C	SSN3	P39073	555 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms