RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W SCS3P53012 380 aa2.03□□□□□ -2.08
RTT107YHR154W PNC1P53184 216 aaKnown RBP2.03□□□□□ -2.08
RTT107YHR154W RPN14P53196 417 aa2.03□□□□□ -2.08
RTT107YHR154W YNL146WP53906 100 aa2.03□□□□□ -2.08
RTT107YHR154W SKO1Q02100 647 aa2.03□□□□□ -2.08
RTT107YHR154W MGR3Q04472 501 aa2.03□□□□□ -2.08
RTT107YHR154W YMR321CQ04898 105 aa2.03□□□□□ -2.08
RTT107YHR154W YLR455WQ06188 304 aa2.03□□□□□ -2.08
RTT107YHR154W MRPL35Q06678 367 aa2.03□□□□□ -2.08
RTT107YHR154W BTS1Q12051 335 aa2.03□□□□□ -2.08
RTT107YHR154W RBD2Q12270 262 aa2.03□□□□□ -2.08
RTT107YHR154W NPC2Q12408 173 aa2.03□□□□□ -2.08
RTT107YHR154W ARG81P05085 880 aa2.03□□□□□ -2.08
RTT107YHR154W WBP1P33767 430 aaKnown RBP2.03□□□□□ -2.08
RTT107YHR154W YBR144CP34215 104 aa2.03□□□□□ -2.08
RTT107YHR154W PHO88P38264 188 aaPredicted RBP2.03□□□□□ -2.08
RTT107YHR154W MSR1P38714 643 aa2.03□□□□□ -2.08
RTT107YHR154W CCT6P39079 546 aa2.03□□□□□ -2.08
RTT107YHR154W PEX7P39108 375 aa2.03□□□□□ -2.08
RTT107YHR154W YMR124WP39523 943 aaKnown RBP2.03□□□□□ -2.08
RTT107YHR154W NMD5P46970 1048 aa2.03□□□□□ -2.08
RTT107YHR154W ROG1P53118 685 aa2.03□□□□□ -2.08
RTT107YHR154W IMO32P53219 342 aa2.03□□□□□ -2.08
RTT107YHR154W YGR127WP53275 312 aa2.03□□□□□ -2.08
RTT107YHR154W BOP3P53958 396 aa2.03□□□□□ -2.08
RTT107YHR154W RPC11Q04307 110 aaPredicted RBP2.03□□□□□ -2.08
RTT107YHR154W ECM18Q04623 453 aa2.03□□□□□ -2.08
RTT107YHR154W SMA2Q04658 369 aa2.03□□□□□ -2.08
RTT107YHR154W NSE1Q07913 336 aa2.03□□□□□ -2.08
RTT107YHR154W TAF3Q12297 353 aa2.03□□□□□ -2.08
RTT107YHR154W LDB17Q12342 491 aa2.03□□□□□ -2.08
RTT107YHR154W GIS3Q12418 502 aa2.03□□□□□ -2.08
RTT107YHR154W ISN1Q99312 450 aa2.03□□□□□ -2.08
RTT107YHR154W SOD2P00447 233 aa2.02□□□□□ -2.09
RTT107YHR154W CBP2P03874 630 aaPredicted RBP2.02□□□□□ -2.09
RTT107YHR154W CDC21P06785 304 aa2.02□□□□□ -2.09
RTT107YHR154W CAR2P07991 424 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W SCH9P11792 824 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W ART10P18634 518 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W UBA1P22515 1024 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W YSR3P23501 404 aa2.02□□□□□ -2.09
RTT107YHR154W VPS3P23643 1011 aa2.02□□□□□ -2.09
RTT107YHR154W GID7P25569 745 aa2.02□□□□□ -2.09
RTT107YHR154W CRM1P30822 1084 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W RME1P32338 300 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W SSE2P32590 693 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W MRE11P32829 692 aa2.02□□□□□ -2.09
RTT107YHR154W MSN4P33749 630 aa2.02□□□□□ -2.09
RTT107YHR154W PHO11P35842 467 aa2.02□□□□□ -2.09
RTT107YHR154W YMR262WP38430 313 aa2.02□□□□□ -2.09
RTT107YHR154W PHO12P38693 467 aa2.02□□□□□ -2.09
RTT107YHR154W YER034WP40022 185 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W PRO2P54885 456 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W APM1Q00776 475 aaPredicted RBP2.02□□□□□ -2.09
RTT107YHR154W GPN2Q08726 347 aaPredicted RBP2.02□□□□□ -2.09
RTT107YHR154W FRE5Q08908 694 aa2.02□□□□□ -2.09
RTT107YHR154W MEX67Q99257 599 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W MSB2P32334 1306 aa2.02□□□□□ -2.09
RTT107YHR154W CDC37P06101 506 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W MET3P08536 511 aa2.02□□□□□ -2.09
RTT107YHR154W TUB3P09734 445 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W PMR1P13586 950 aa2.02□□□□□ -2.09
RTT107YHR154W ADY2P25613 283 aa2.02□□□□□ -2.09
RTT107YHR154W CDC20P26309 610 aa2.02□□□□□ -2.09
RTT107YHR154W BUD14P27637 709 aa2.02□□□□□ -2.09
RTT107YHR154W GAC1P28006 793 aa2.02□□□□□ -2.09
RTT107YHR154W TIF3P34167 436 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W YKL071WP36086 256 aa2.02□□□□□ -2.09
RTT107YHR154W RPF2P36160 344 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W IMD2P38697 523 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W MNN9P39107 395 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W YJL206CP39529 758 aa2.02□□□□□ -2.09
RTT107YHR154W YFR020WP43600 232 aa2.02□□□□□ -2.09
RTT107YHR154W YGL039WP53183 348 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W PLB2Q03674 706 aa2.02□□□□□ -2.09
RTT107YHR154W RRN11Q04712 507 aa2.02□□□□□ -2.09
RTT107YHR154W KAP95Q06142 861 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W ECM7Q06200 448 aa2.02□□□□□ -2.09
RTT107YHR154W ATG23Q06671 453 aa2.02□□□□□ -2.09
RTT107YHR154W VAC14Q06708 880 aa2.02□□□□□ -2.09
RTT107YHR154W YDL086WQ07505 273 aa2.02□□□□□ -2.09
RTT107YHR154W TEN1Q07921 160 aa2.02□□□□□ -2.09
RTT107YHR154W UAF30Q08747 228 aa2.02□□□□□ -2.09
RTT107YHR154W YOR389WQ08912 624 aa2.02□□□□□ -2.09
RTT107YHR154W APC2Q12440 853 aa2.02□□□□□ -2.09
RTT107YHR154W YPR089WO13585 888 aa2.02□□□□□ -2.09
RTT107YHR154W HIS5P07172 385 aa2.02□□□□□ -2.09
RTT107YHR154W KGD1P20967 1014 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W GAS1P22146 559 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W PDB1P32473 366 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W NTR2P36118 322 aaPredicted RBP2.02□□□□□ -2.09
RTT107YHR154W YPT35P38815 214 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W LIN1P38852 340 aaPredicted RBP2.02□□□□□ -2.09
RTT107YHR154W SNL1P40548 159 aa2.02□□□□□ -2.09
RTT107YHR154W STB2P46679 850 aa2.02□□□□□ -2.09
RTT107YHR154W URB2P47108 1174 aa2.02□□□□□ -2.09
RTT107YHR154W MUP1P50276 574 aa2.02□□□□□ -2.09
RTT107YHR154W NMA2P53204 395 aa2.02□□□□□ -2.09
RTT107YHR154W YMR310CQ04867 317 aaPredicted RBP2.02□□□□□ -2.09
RTT107YHR154W ARR1Q06596 294 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms