RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W SYO1Q07395 620 aa2.34□□□□□ -2.04
NIC96YFR002W HSH49Q99181 213 aaPredicted RBP2.34□□□□□ -2.04
NIC96YFR002W YKL023WP36103 277 aaKnown RBP2.33□□□□□ -2.04
NIC96YFR002W GPD2P41911 440 aaKnown RBP2.33□□□□□ -2.04
NIC96YFR002W SCD6P45978 349 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
NIC96YFR002W YJR154WP47181 346 aa2.33□□□□□ -2.04
NIC96YFR002W ALT2P52892 507 aa2.33□□□□□ -2.04
NIC96YFR002W YGR127WP53275 312 aa2.33□□□□□ -2.04
NIC96YFR002W SMA2Q04658 369 aa2.33□□□□□ -2.04
NIC96YFR002W YLR287CQ05881 355 aa2.33□□□□□ -2.04
NIC96YFR002W LUC7Q07508 261 aaPredicted RBP2.33□□□□□ -2.04
NIC96YFR002W YOR365CQ08844 703 aa2.33□□□□□ -2.04
NIC96YFR002W RRG1Q12167 365 aaPredicted RBP2.33□□□□□ -2.04
NIC96YFR002W ADE6P38972 1358 aaKnown RBP2.33□□□□□ -2.04
NIC96YFR002W RPL20AP0CX23 172 aaKnown RBP2.33□□□□□ -2.04
NIC96YFR002W RPL20BP0CX24 172 aaPredicted RBP2.33□□□□□ -2.04
NIC96YFR002W OLE1P21147 510 aaKnown RBP2.33□□□□□ -2.04
NIC96YFR002W SSE2P32590 693 aaKnown RBP2.33□□□□□ -2.04
NIC96YFR002W ICS2P38284 255 aa2.33□□□□□ -2.04
NIC96YFR002W YBR225WP38321 900 aa2.33□□□□□ -2.04
NIC96YFR002W APE4P38821 490 aa2.33□□□□□ -2.04
NIC96YFR002W LYS14P40971 790 aa2.33□□□□□ -2.04
NIC96YFR002W YPI1P43587 155 aa2.33□□□□□ -2.04
NIC96YFR002W GSC2P40989 1895 aa2.32□□□□□ -2.04
NIC96YFR002W MF(ALPHA)1P01149 165 aa2.32□□□□□ -2.04
NIC96YFR002W DAL5P15365 543 aa2.32□□□□□ -2.04
NIC96YFR002W PRE8P23639 250 aa2.32□□□□□ -2.04
NIC96YFR002W RPS0AP32905 252 aaKnown RBP2.32□□□□□ -2.04
NIC96YFR002W YBR144CP34215 104 aa2.32□□□□□ -2.04
NIC96YFR002W CCT6P39079 546 aa2.32□□□□□ -2.04
NIC96YFR002W YJL132WP47014 750 aa2.32□□□□□ -2.04
NIC96YFR002W YGR126WP53274 230 aa2.32□□□□□ -2.04
NIC96YFR002W MEH1Q02205 184 aa2.32□□□□□ -2.04
NIC96YFR002W YML037CQ03703 340 aa2.32□□□□□ -2.04
NIC96YFR002W MFB1Q04922 465 aa2.32□□□□□ -2.04
NIC96YFR002W YDL009CQ12210 107 aa2.32□□□□□ -2.04
NIC96YFR002W FAS2P19097 1887 aaKnown RBP2.32□□□□□ -2.04
NIC96YFR002W HSP82P02829 709 aaKnown RBP2.32□□□□□ -2.04
NIC96YFR002W RAD52P06778 471 aaKnown RBP2.32□□□□□ -2.04
NIC96YFR002W PEP4P07267 405 aaKnown RBP2.32□□□□□ -2.04
NIC96YFR002W FUR1P18562 216 aaKnown RBP2.32□□□□□ -2.04
NIC96YFR002W YCK1P23291 538 aa2.32□□□□□ -2.04
NIC96YFR002W RPC53P25441 422 aa2.32□□□□□ -2.04
NIC96YFR002W POL4P25615 582 aa2.32□□□□□ -2.04
NIC96YFR002W YIH1P25637 258 aa2.32□□□□□ -2.04
NIC96YFR002W ERG3P32353 365 aa2.32□□□□□ -2.04
NIC96YFR002W FRE1P32791 686 aa2.32□□□□□ -2.04
NIC96YFR002W NPL6P32832 435 aa2.32□□□□□ -2.04
NIC96YFR002W PMU1P36069 295 aa2.32□□□□□ -2.04
NIC96YFR002W PFF1P38244 976 aa2.32□□□□□ -2.04
NIC96YFR002W YHR210CP38893 341 aa2.32□□□□□ -2.04
NIC96YFR002W LSM5P40089 93 aaKnown RBP2.32□□□□□ -2.04
NIC96YFR002W IDP2P41939 412 aa2.32□□□□□ -2.04
NIC96YFR002W LCL3P53153 274 aa2.32□□□□□ -2.04
NIC96YFR002W SLD5Q03406 294 aa2.32□□□□□ -2.04
NIC96YFR002W SYF1Q04048 859 aaPredicted RBP2.32□□□□□ -2.04
NIC96YFR002W YDL057WQ07379 328 aa2.32□□□□□ -2.04
NIC96YFR002W SIR4P11978 1358 aa2.31□□□□□ -2.04
NIC96YFR002W SUC2P00724 532 aa2.31□□□□□ -2.04
NIC96YFR002W CAR1P00812 333 aaKnown RBP2.31□□□□□ -2.04
NIC96YFR002W NAT1P12945 854 aaKnown RBP2.31□□□□□ -2.04
NIC96YFR002W SAC6P32599 642 aaKnown RBP2.31□□□□□ -2.04
NIC96YFR002W TIF3P34167 436 aaKnown RBP2.31□□□□□ -2.04
NIC96YFR002W MUM2P38236 366 aa2.31□□□□□ -2.04
NIC96YFR002W CIN4P39110 191 aa2.31□□□□□ -2.04
NIC96YFR002W YCL021W-AQ96VH3 125 aa2.31□□□□□ -2.04
NIC96YFR002W MRP13P12686 339 aa2.31□□□□□ -2.04
NIC96YFR002W REV1P12689 985 aa2.31□□□□□ -2.04
NIC96YFR002W YCR007CP25354 239 aa2.31□□□□□ -2.04
NIC96YFR002W PEX5P35056 612 aa2.31□□□□□ -2.04
NIC96YFR002W BUD22Q04347 519 aaKnown RBP2.31□□□□□ -2.04
NIC96YFR002W MRPL51Q06090 140 aaPredicted RBP2.31□□□□□ -2.04
NIC96YFR002W GRX6Q12438 231 aa2.31□□□□□ -2.04
NIC96YFR002W ATR1P13090 542 aa2.3□□□□□ -2.04
NIC96YFR002W RNA14P25298 677 aaKnown RBP2.3□□□□□ -2.04
NIC96YFR002W UBP11P36026 717 aa2.3□□□□□ -2.04
NIC96YFR002W BYE1P36106 594 aa2.3□□□□□ -2.04
NIC96YFR002W LRP1P38801 184 aaKnown RBP2.3□□□□□ -2.04
NIC96YFR002W SHO1P40073 367 aa2.3□□□□□ -2.04
NIC96YFR002W DUO1P53168 247 aaKnown RBP2.3□□□□□ -2.04
NIC96YFR002W ERO1Q03103 563 aa2.3□□□□□ -2.04
NIC96YFR002W NGL3Q03210 505 aa2.3□□□□□ -2.04
NIC96YFR002W RPC11Q04307 110 aaPredicted RBP2.3□□□□□ -2.04
NIC96YFR002W COQ9Q05779 260 aa2.3□□□□□ -2.04
NIC96YFR002W MET17P06106 444 aa2.3□□□□□ -2.04
NIC96YFR002W RED1P14291 827 aa2.3□□□□□ -2.04
NIC96YFR002W TPM1P17536 199 aaKnown RBP2.3□□□□□ -2.04
NIC96YFR002W ROX1P25042 368 aa2.3□□□□□ -2.04
NIC96YFR002W ELO2P25358 347 aa2.3□□□□□ -2.04
NIC96YFR002W VPH1P32563 840 aaKnown RBP2.3□□□□□ -2.04
NIC96YFR002W TUL1P36096 758 aa2.3□□□□□ -2.04
NIC96YFR002W HAT2P39984 401 aa2.3□□□□□ -2.04
NIC96YFR002W YML6P51998 286 aa2.3□□□□□ -2.04
NIC96YFR002W YGR016WP53209 190 aa2.3□□□□□ -2.04
NIC96YFR002W RCF1Q03713 159 aa2.3□□□□□ -2.04
NIC96YFR002W FMP40Q08968 688 aaPredicted RBP2.3□□□□□ -2.04
NIC96YFR002W PMR1P13586 950 aa2.29□□□□□ -2.04
NIC96YFR002W CKA1P15790 372 aa2.29□□□□□ -2.04
NIC96YFR002W SWH1P35845 1188 aa2.29□□□□□ -2.04
NIC96YFR002W WSC2P53832 503 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms