RNA–Protein interactions for RNA: YFL002W-B

YFL002W-B, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YFL002W-B, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-BYFL002W-B GOR1P53839 350 aa2.97□□□□□ -1.93
YFL002W-BYFL002W-B SIL1Q08199 421 aa2.97□□□□□ -1.93
YFL002W-BYFL002W-B THP3Q12049 470 aaKnown RBP2.97□□□□□ -1.93
YFL002W-BYFL002W-B GRX6Q12438 231 aa2.97□□□□□ -1.93
YFL002W-BYFL002W-B HIP1P06775 603 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B SAM1P10659 382 aaKnown RBP2.96□□□□□ -1.93
YFL002W-BYFL002W-B PMR1P13586 950 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B CKA1P15790 372 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B SAM2P19358 384 aaKnown RBP2.96□□□□□ -1.93
YFL002W-BYFL002W-B ROX1P25042 368 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B YCR100CP25606 316 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B HXT3P32466 567 aaKnown RBP2.96□□□□□ -1.93
YFL002W-BYFL002W-B MFT1P33441 392 aaKnown RBP2.96□□□□□ -1.93
YFL002W-BYFL002W-B SAS3P34218 831 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B RSM22P36056 628 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B YCR041WP37265 110 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B SMF1P38925 575 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B IRC6P43615 237 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B MRPL19P53875 158 aa2.96□□□□□ -1.93
YFL002W-BYFL002W-B LEU4P06208 619 aaKnown RBP2.95□□□□□ -1.94
YFL002W-BYFL002W-B MRP7P12687 371 aa2.95□□□□□ -1.94
YFL002W-BYFL002W-B ARF3P40994 183 aaRIP-Chip data2.95□□□□□ -1.94not detected
YFL002W-BYFL002W-B OST1P41543 476 aaKnown RBP2.95□□□□□ -1.94
YFL002W-BYFL002W-B YPI1P43587 155 aa2.95□□□□□ -1.94
YFL002W-BYFL002W-B YJL132WP47014 750 aa2.95□□□□□ -1.94
YFL002W-BYFL002W-B COG4Q06096 861 aa2.95□□□□□ -1.94
YFL002W-BYFL002W-B YOR387CQ08910 206 aa2.95□□□□□ -1.94
YFL002W-BYFL002W-B YLR278CQ05854 1341 aa2.95□□□□□ -1.94
YFL002W-BYFL002W-B NAM9P27929 486 aa2.94□□□□□ -1.94
YFL002W-BYFL002W-B RAD14P28519 371 aa2.94□□□□□ -1.94
YFL002W-BYFL002W-B SEC66P33754 206 aa2.94□□□□□ -1.94
YFL002W-BYFL002W-B TAF11Q04226 346 aa2.94□□□□□ -1.94
YFL002W-BYFL002W-B RTN2Q12443 393 aa2.94□□□□□ -1.94
YFL002W-BYFL002W-B RPN12P32496 274 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B NIP100P33420 868 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B NAT2P37293 288 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B CCT2P39076 527 aaKnown RBP2.93□□□□□ -1.94
YFL002W-BYFL002W-B RPA49Q01080 415 aaPredicted RBP2.93□□□□□ -1.94
YFL002W-BYFL002W-B YDR387CQ04162 555 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B PGA3Q12746 312 aaKnown RBP2.93□□□□□ -1.94
YFL002W-BYFL002W-B LPD1P09624 499 aaKnown RBP2.93□□□□□ -1.94
YFL002W-BYFL002W-B YAR066WP0CX18 203 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B YHR214WP0CX19 203 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B REV1P12689 985 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B RED1P14291 827 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B HEM15P16622 393 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B ITR1P30605 584 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B ERG3P32353 365 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B CBP4P37267 147 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B NDT80P38830 627 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B YFL067WP43537 175 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B CAF40P53829 373 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B YIF1P53845 314 aaKnown RBP2.93□□□□□ -1.94
YFL002W-BYFL002W-B SUB1P54000 292 aaKnown RBP2.93□□□□□ -1.94
YFL002W-BYFL002W-B RQC1Q05468 723 aaKnown RBP2.93□□□□□ -1.94
YFL002W-BYFL002W-B MRPL35Q06678 367 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B YPL199CQ08954 240 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B TMS1Q12116 473 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B YPR022CQ12139 1133 aa2.93□□□□□ -1.94
YFL002W-BYFL002W-B BRR1Q99177 341 aaPredicted RBP2.93□□□□□ -1.94
YFL002W-BYFL002W-B INH1P01097 85 aa2.92□□□□□ -1.94
YFL002W-BYFL002W-B NOP1P15646 327 aaKnown RBP2.92□□□□□ -1.94
YFL002W-BYFL002W-B CPR4P25334 318 aa2.92□□□□□ -1.94
YFL002W-BYFL002W-B SWH1P35845 1188 aa2.92□□□□□ -1.94
YFL002W-BYFL002W-B SWD3P38123 315 aa2.92□□□□□ -1.94
YFL002W-BYFL002W-B TFG2P41896 400 aaPredicted RBP2.92□□□□□ -1.94
YFL002W-BYFL002W-B GPD2P41911 440 aaKnown RBP2.92□□□□□ -1.94
YFL002W-BYFL002W-B YIP1P53039 248 aa2.92□□□□□ -1.94
YFL002W-BYFL002W-B MDM1Q01846 1127 aa2.92□□□□□ -1.94
YFL002W-BYFL002W-B ELP3Q02908 557 aaKnown RBP2.92□□□□□ -1.94
YFL002W-BYFL002W-B ODC1Q03028 310 aa2.92□□□□□ -1.94
YFL002W-BYFL002W-B SYF1Q04048 859 aaPredicted RBP2.92□□□□□ -1.94
YFL002W-BYFL002W-B RHO2P06781 192 aa2.91□□□□□ -1.94
YFL002W-BYFL002W-B RPI1P23250 407 aaKnown RBP2.91□□□□□ -1.94
YFL002W-BYFL002W-B DEG1P31115 442 aaKnown RBP2.91□□□□□ -1.94
YFL002W-BYFL002W-B PRP21P32524 280 aaPredicted RBP2.91□□□□□ -1.94
YFL002W-BYFL002W-B PNG1Q02890 363 aa2.91□□□□□ -1.94
YFL002W-BYFL002W-B ARX1Q03862 593 aaKnown RBP2.91□□□□□ -1.94
YFL002W-BYFL002W-B SOV1Q04748 898 aa2.91□□□□□ -1.94
YFL002W-BYFL002W-B PBA1Q05778 276 aa2.91□□□□□ -1.94
YFL002W-BYFL002W-B TSR2Q06672 205 aaKnown RBP2.91□□□□□ -1.94
YFL002W-BYFL002W-B TSR1Q07381 788 aaKnown RBP2.91□□□□□ -1.94
YFL002W-BYFL002W-B CLN3P13365 580 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B APE2P32454 952 aaKnown RBP2.9□□□□□ -1.95
YFL002W-BYFL002W-B YBL059WP34224 193 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B YBR137WP38276 179 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B YBP1P38315 674 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B SAS2P40963 338 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B WWM1P43582 211 aaKnown RBP2.9□□□□□ -1.95
YFL002W-BYFL002W-B VTC2P43585 828 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B NCA3P46955 337 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B URB2P47108 1174 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B RMD9P53140 646 aaKnown RBP2.9□□□□□ -1.95
YFL002W-BYFL002W-B YGR250CP53316 781 aaKnown RBP2.9□□□□□ -1.95
YFL002W-BYFL002W-B OGG1P53397 376 aaPredicted RBP2.9□□□□□ -1.95
YFL002W-BYFL002W-B ERV2Q12284 196 aa2.9□□□□□ -1.95
YFL002W-BYFL002W-B SPS4P09937 338 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B SEC63P14906 663 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B ECM25P32525 599 aa2.89□□□□□ -1.95
YFL002W-BYFL002W-B VHC1P38329 1120 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms