RNA–Protein interactions for RNA: YDR257C

RKM4, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM4, Length 1,485 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM4	YDR257C	ART5	P53244	586 aa	Known RBP	5	□□□□□ -1.61
RKM4	YDR257C	SKO1	Q02100	647 aa		5	□□□□□ -1.61
RKM4	YDR257C	IRC15	Q02733	499 aa		5	□□□□□ -1.61
RKM4	YDR257C	AIM32	Q04689	311 aa		5	□□□□□ -1.61
RKM4	YDR257C	VPS74	Q06385	345 aa		5	□□□□□ -1.61
RKM4	YDR257C	GRS2	Q06817	618 aa		5	□□□□□ -1.61
RKM4	YDR257C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
RKM4	YDR257C	HSP42	Q12329	375 aa		5	□□□□□ -1.61
RKM4	YDR257C	PPZ1	P26570	692 aa		5	□□□□□ -1.61
RKM4	YDR257C	ZIM17	P42844	174 aa		5	□□□□□ -1.61
RKM4	YDR257C	IKS1	P47042	667 aa		5	□□□□□ -1.61
RKM4	YDR257C	CIK1	Q01649	594 aa		5	□□□□□ -1.61
RKM4	YDR257C	RIP1	P08067	215 aa		4.99	□□□□□ -1.61
RKM4	YDR257C	CDC23	P16522	626 aa		4.99	□□□□□ -1.61
RKM4	YDR257C	CPR2	P23285	205 aa		4.99	□□□□□ -1.61
RKM4	YDR257C	BUB3	P26449	341 aa		4.99	□□□□□ -1.61
RKM4	YDR257C	ELP2	P42935	788 aa		4.99	□□□□□ -1.61
RKM4	YDR257C	RRD2	Q12461	358 aa		4.99	□□□□□ -1.61
RKM4	YDR257C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RKM4	YDR257C	ERV1	P27882	189 aa		4.98	□□□□□ -1.61
RKM4	YDR257C	RLI1	Q03195	608 aa	Known RBP	4.98	□□□□□ -1.61
RKM4	YDR257C	VAM3	Q12241	283 aa		4.98	□□□□□ -1.61
RKM4	YDR257C	RKM5	Q12367	367 aa		4.98	□□□□□ -1.61
RKM4	YDR257C	PRP21	P32524	280 aa	Predicted RBP	4.97	□□□□□ -1.61
RKM4	YDR257C	PTR2	P32901	601 aa		4.97	□□□□□ -1.61
RKM4	YDR257C	TCB2	P48231	1178 aa		4.97	□□□□□ -1.61
RKM4	YDR257C	VPS9	P54787	451 aa		4.97	□□□□□ -1.61
RKM4	YDR257C	RPM2	Q02773	1202 aa		4.97	□□□□□ -1.61
RKM4	YDR257C	HOT1	Q03213	719 aa		4.97	□□□□□ -1.61
RKM4	YDR257C	HSP31	Q04432	237 aa		4.97	□□□□□ -1.61
RKM4	YDR257C	YLR278C	Q05854	1341 aa		4.97	□□□□□ -1.61
RKM4	YDR257C	SEC1	P30619	724 aa	Known RBP	4.96	□□□□□ -1.62
RKM4	YDR257C	RSM22	P36056	628 aa		4.96	□□□□□ -1.62
RKM4	YDR257C	YJL070C	P40361	888 aa		4.96	□□□□□ -1.62
RKM4	YDR257C	DSL1	P53847	754 aa		4.96	□□□□□ -1.62
RKM4	YDR257C	MTF1	P14908	341 aa	Known RBP	4.95	□□□□□ -1.62
RKM4	YDR257C	KRE2	P27809	442 aa		4.95	□□□□□ -1.62
RKM4	YDR257C	NDC1	P32500	655 aa		4.95	□□□□□ -1.62
RKM4	YDR257C	SLM4	P38247	162 aa		4.95	□□□□□ -1.62
RKM4	YDR257C	MMS4	P38257	691 aa		4.95	□□□□□ -1.62
RKM4	YDR257C	RRT2	P38332	387 aa		4.95	□□□□□ -1.62
RKM4	YDR257C	LRP1	P38801	184 aa	Known RBP	4.95	□□□□□ -1.62
RKM4	YDR257C	CCT2	P39076	527 aa	Known RBP	4.95	□□□□□ -1.62
RKM4	YDR257C	RPS0B	P46654	252 aa	Known RBP	4.95	□□□□□ -1.62
RKM4	YDR257C	KTR5	P53966	522 aa	Predicted RBP	4.95	□□□□□ -1.62
RKM4	YDR257C	SXM1	Q04175	944 aa	Known RBP	4.95	□□□□□ -1.62
RKM4	YDR257C	MED2	Q12124	431 aa		4.95	□□□□□ -1.62
RKM4	YDR257C	URA4	P20051	364 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	CDC60	P26637	1090 aa	Known RBP	4.94	□□□□□ -1.62
RKM4	YDR257C	SIN4	P32259	974 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	HIR2	P32480	875 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	SNM1	P40993	198 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RKM4	YDR257C	GWT1	P47026	490 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	ACL4	Q03771	387 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	YMR130W	Q04223	302 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	HCR1	Q05775	265 aa	Known RBP	4.94	□□□□□ -1.62
RKM4	YDR257C	DAP1	Q12091	152 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	HIP1	P06775	603 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	MRS3	P10566	314 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	BRF1	P29056	596 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	BEM1	P29366	551 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	FRE2	P36033	711 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	MMR1	Q06324	491 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	VPS54	Q12071	889 aa		4.94	□□□□□ -1.62
RKM4	YDR257C	CYB2	P00175	591 aa		4.93	□□□□□ -1.62
RKM4	YDR257C	SEC63	P14906	663 aa		4.93	□□□□□ -1.62
RKM4	YDR257C	CLN1	P20437	546 aa		4.93	□□□□□ -1.62
RKM4	YDR257C	RTT107	P38850	1070 aa		4.93	□□□□□ -1.62
RKM4	YDR257C	ISC1	P40015	477 aa	Known RBP	4.93	□□□□□ -1.62
RKM4	YDR257C	SHO1	P40073	367 aa		4.93	□□□□□ -1.62
RKM4	YDR257C	RTT101	P47050	842 aa		4.93	□□□□□ -1.62
RKM4	YDR257C	YDR387C	Q04162	555 aa		4.93	□□□□□ -1.62
RKM4	YDR257C	RKM1	Q08961	583 aa	Predicted RBP	4.93	□□□□□ -1.62
RKM4	YDR257C	CTF3	Q12748	733 aa		4.93	□□□□□ -1.62
RKM4	YDR257C	RPI1	P23250	407 aa	Known RBP	4.92	□□□□□ -1.62
RKM4	YDR257C	RHB1	P25378	209 aa		4.92	□□□□□ -1.62
RKM4	YDR257C	APE2	P32454	952 aa	Known RBP	4.92	□□□□□ -1.62
RKM4	YDR257C	YHR054C	P38780	354 aa		4.92	□□□□□ -1.62
RKM4	YDR257C	YJR011C	P47086	261 aa	Predicted RBP	4.92	□□□□□ -1.62
RKM4	YDR257C	YGR111W	P53265	400 aa		4.92	□□□□□ -1.62
RKM4	YDR257C	RPT4	P53549	437 aa	Known RBP	4.92	□□□□□ -1.62
RKM4	YDR257C	PNG1	Q02890	363 aa		4.92	□□□□□ -1.62
RKM4	YDR257C	DCS1	Q06151	350 aa		4.92	□□□□□ -1.62
RKM4	YDR257C	DIS3	Q08162	1001 aa	Known RBP	4.92	□□□□□ -1.62
RKM4	YDR257C	SNU66	Q12420	587 aa	Predicted RBP	4.92	□□□□□ -1.62
RKM4	YDR257C	HIS4	P00815	799 aa	Known RBP	4.91	□□□□□ -1.62
RKM4	YDR257C	YAR066W	P0CX18	203 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	YHR214W	P0CX19	203 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	SPC110	P32380	944 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	RFC3	P38629	340 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	ALG8	P40351	577 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	SAS2	P40963	338 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	ECM27	P47144	725 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	PCP1	P53259	346 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	GYL1	Q04322	720 aa		4.91	□□□□□ -1.62
RKM4	YDR257C	ERP1	Q05359	219 aa	Known RBP	4.91	□□□□□ -1.62
RKM4	YDR257C	RPL15A	P05748	204 aa	Known RBP	4.9	□□□□□ -1.62
RKM4	YDR257C	SPO7	P18410	259 aa		4.9	□□□□□ -1.62
RKM4	YDR257C	GEX1	P25596	615 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms