RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	ORC5	P50874	479 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	RPN14	P53196	417 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	TIM44	Q01852	431 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	RRN5	Q02983	363 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	VPS20	Q04272	221 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	MSC3	Q05812	728 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	POS5	Q06892	414 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	GSH2	Q08220	491 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	SGT2	Q12118	346 aa	Known RBP	5.49	□□□□□ -1.53
SNF11	YDR073W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
SNF11	YDR073W	SUT2	Q12286	268 aa		5.49	□□□□□ -1.53
SNF11	YDR073W	SNF3	P10870	884 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	CDC43	P18898	376 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	TYR1	P20049	452 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	STV1	P37296	890 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	RRN10	P38204	145 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	UBA4	P38820	440 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	KEL1	P38853	1164 aa	Known RBP	5.48	□□□□□ -1.53
SNF11	YDR073W	SPT8	P38915	602 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	ERV46	P39727	415 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	YMR147W	P40218	223 aa	Known RBP	5.48	□□□□□ -1.53
SNF11	YDR073W	TFG2	P41896	400 aa	Predicted RBP	5.48	□□□□□ -1.53
SNF11	YDR073W	PYK2	P52489	506 aa	Known RBP	5.48	□□□□□ -1.53
SNF11	YDR073W	MPS2	P53159	387 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	SMM1	P53720	384 aa	Known RBP	5.48	□□□□□ -1.53
SNF11	YDR073W	KIN4	Q01919	800 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	SHR3	Q02774	210 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	PDR8	Q06149	701 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	YLR413W	Q06689	675 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	NDJ1	Q12366	352 aa		5.48	□□□□□ -1.53
SNF11	YDR073W	SCEI	P03882	235 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	SAM1	P10659	382 aa	Known RBP	5.47	□□□□□ -1.53
SNF11	YDR073W	CNA1	P23287	553 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	SAT4	P25333	603 aa	Known RBP	5.47	□□□□□ -1.53
SNF11	YDR073W	GEX1	P25596	615 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	TRM2	P33753	639 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	OCT1	P35999	772 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	CBP4	P37267	147 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	YBL028C	P38202	106 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	KAP104	P38217	918 aa	Known RBP	5.47	□□□□□ -1.53
SNF11	YDR073W	PCA1	P38360	1216 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	PCF11	P39081	626 aa	Predicted RBP	5.47	□□□□□ -1.53
SNF11	YDR073W	MNN9	P39107	395 aa	Known RBP	5.47	□□□□□ -1.53
SNF11	YDR073W	KTR5	P53966	522 aa	Predicted RBP	5.47	□□□□□ -1.53
SNF11	YDR073W	SMA1	Q02651	245 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	EKI1	Q03764	534 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	GIS1	Q03833	894 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	RNH1	Q04740	348 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	ULA1	Q12059	462 aa		5.47	□□□□□ -1.53
SNF11	YDR073W	VPS63	O13549	108 aa		5.46	□□□□□ -1.54
SNF11	YDR073W	CDC37	P06101	506 aa	Known RBP	5.46	□□□□□ -1.54
SNF11	YDR073W	PEP5	P12868	1029 aa		5.46	□□□□□ -1.54
SNF11	YDR073W	HSP104	P31539	908 aa	Known RBP	5.46	□□□□□ -1.54
SNF11	YDR073W	SMC2	P38989	1170 aa	Known RBP	5.46	□□□□□ -1.54
SNF11	YDR073W	SNU56	Q03782	492 aa	Known RBP	5.46	□□□□□ -1.54
SNF11	YDR073W	SMA2	Q04658	369 aa		5.46	□□□□□ -1.54
SNF11	YDR073W	MDM30	Q05930	598 aa		5.46	□□□□□ -1.54
SNF11	YDR073W	YOR365C	Q08844	703 aa		5.46	□□□□□ -1.54
SNF11	YDR073W	RRD2	Q12461	358 aa		5.46	□□□□□ -1.54
SNF11	YDR073W	SFG1	Q12507	346 aa		5.46	□□□□□ -1.54
SNF11	YDR073W	RAD52	P06778	471 aa	Known RBP	5.45	□□□□□ -1.54
SNF11	YDR073W	AQY1	P0CD91	305 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	PET18	P25362	215 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	PRP21	P32524	280 aa	Predicted RBP	5.45	□□□□□ -1.54
SNF11	YDR073W	MSN2	P33748	704 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	YUH1	P35127	236 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	DUG2	P38149	878 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	ARP1	P38696	384 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	SPC97	P38863	823 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	SEC27	P41811	889 aa	Known RBP	5.45	□□□□□ -1.54
SNF11	YDR073W	TLG1	Q03322	224 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	IPK1	Q06667	281 aa		5.45	□□□□□ -1.54
SNF11	YDR073W	MRPL23	Q12487	163 aa	Predicted RBP	5.45	□□□□□ -1.54
SNF11	YDR073W	YPR089W	O13585	888 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	COX3	P00420	269 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	ADE4	P04046	510 aa	Known RBP	5.44	□□□□□ -1.54
SNF11	YDR073W	RPB8	P20436	146 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	MAK32	P23060	363 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	GSY2	P27472	705 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.44	□□□□□ -1.54	not detected
SNF11	YDR073W	SOR1	P35497	357 aa	Known RBP	5.44	□□□□□ -1.54
SNF11	YDR073W	MIC60	P36112	540 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	TIF5	P38431	405 aa	Known RBP	5.44	□□□□□ -1.54
SNF11	YDR073W	GPI16	P38875	610 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	STN1	P38960	494 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	YIL060W	P40519	144 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	YHC3	P47040	408 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	IMD3	P50095	523 aa	Known RBP	5.44	□□□□□ -1.54
SNF11	YDR073W	BUD32	P53323	261 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	ASI1	P54074	624 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	HSP31	Q04432	237 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	TMN2	Q04562	672 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	YLR297W	Q05899	129 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	SOR2	Q07786	357 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	RDR1	Q08904	546 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	RUP1	Q12242	671 aa		5.44	□□□□□ -1.54
SNF11	YDR073W	NFT1	P0CE68	1218 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	SAG1	P20840	650 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	ATP11	P32453	318 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	PTK1	P36002	662 aa	Predicted RBP	5.43	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms