RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C UBR2Q07963 1872 aa3.96□□□□□ -1.78
PTA1YAL043C UNG1P12887 359 aa3.96□□□□□ -1.78
PTA1YAL043C GCN3P14741 305 aa3.96□□□□□ -1.78
PTA1YAL043C GRX2P17695 143 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C PEX1P24004 1043 aa3.96□□□□□ -1.78
PTA1YAL043C RHB1P25378 209 aa3.96□□□□□ -1.78
PTA1YAL043C CYS3P31373 394 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C SEC17P32602 292 aa3.96□□□□□ -1.78
PTA1YAL043C BEM3P32873 1128 aa3.96□□□□□ -1.78
PTA1YAL043C SCD5P34758 872 aa3.96□□□□□ -1.78
PTA1YAL043C YHL041WP38730 149 aa3.96□□□□□ -1.78
PTA1YAL043C MNN1P39106 762 aa3.96□□□□□ -1.78
PTA1YAL043C AST2P39945 430 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C PSF2P40359 213 aa3.96□□□□□ -1.78
PTA1YAL043C AGP3P43548 558 aa3.96□□□□□ -1.78
PTA1YAL043C DLD2P46681 530 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C NNF1P47149 201 aa3.96□□□□□ -1.78
PTA1YAL043C MSE1P48525 536 aa3.96□□□□□ -1.78
PTA1YAL043C IMD4P50094 524 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C YMR111CQ04461 462 aaPredicted RBP3.96□□□□□ -1.78
PTA1YAL043C YLR225CQ05948 407 aaKnown RBP3.96□□□□□ -1.78
PTA1YAL043C ECM22Q05958 814 aaPredicted RBP3.96□□□□□ -1.78
PTA1YAL043C SGO1Q08490 590 aa3.96□□□□□ -1.78
PTA1YAL043C MET2P08465 486 aa3.95□□□□□ -1.78
PTA1YAL043C SST2P11972 698 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C GUT2P32191 649 aa3.95□□□□□ -1.78
PTA1YAL043C MET4P32389 672 aa3.95□□□□□ -1.78
PTA1YAL043C ATP11P32453 318 aa3.95□□□□□ -1.78
PTA1YAL043C PRP18P33411 251 aaPredicted RBP3.95□□□□□ -1.78
PTA1YAL043C GND1P38720 489 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C ATG7P38862 630 aa3.95□□□□□ -1.78
PTA1YAL043C YHR219WP38900 624 aa3.95□□□□□ -1.78
PTA1YAL043C FHL1P39521 936 aa3.95□□□□□ -1.78
PTA1YAL043C YAR028WP39548 234 aa3.95□□□□□ -1.78
PTA1YAL043C YHB1P39676 399 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C YEL020CP39994 560 aa3.95□□□□□ -1.78
PTA1YAL043C SEC28P40509 296 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C GCD14P46959 383 aaPredicted RBP3.95□□□□□ -1.78
PTA1YAL043C AIM23P47015 356 aa3.95□□□□□ -1.78
PTA1YAL043C YGR054WP53235 642 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C TOF2Q02208 771 aa3.95□□□□□ -1.78
PTA1YAL043C YDR132CQ03900 495 aa3.95□□□□□ -1.78
PTA1YAL043C MUS81Q04149 632 aaPredicted RBP3.95□□□□□ -1.78
PTA1YAL043C ATG38Q05789 226 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C MDM36Q06820 579 aa3.95□□□□□ -1.78
PTA1YAL043C PEX27Q08580 376 aa3.95□□□□□ -1.78
PTA1YAL043C MLH3Q12083 715 aa3.95□□□□□ -1.78
PTA1YAL043C RTC5Q12108 567 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C YPL245WQ12179 454 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C MNL2Q12205 849 aa3.95□□□□□ -1.78
PTA1YAL043C PST1Q12355 444 aa3.95□□□□□ -1.78
PTA1YAL043C MHF2Q3E829 80 aa3.95□□□□□ -1.78
PTA1YAL043C YBL113CQ7M4S9 792 aa3.95□□□□□ -1.78
PTA1YAL043C SCH9P11792 824 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C ERG6P25087 383 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C PEX34P25584 144 aa3.95□□□□□ -1.78
PTA1YAL043C ACH1P32316 526 aa3.95□□□□□ -1.78
PTA1YAL043C MF(ALPHA)2P32435 120 aa3.95□□□□□ -1.78
PTA1YAL043C WHI3P34761 661 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C IRS4P36115 615 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C ALY1P36117 915 aa3.95□□□□□ -1.78
PTA1YAL043C YHR033WP38690 423 aa3.95□□□□□ -1.78
PTA1YAL043C RAD55P38953 406 aa3.95□□□□□ -1.78
PTA1YAL043C MBP1P39678 833 aa3.95□□□□□ -1.78
PTA1YAL043C ERV46P39727 415 aa3.95□□□□□ -1.78
PTA1YAL043C LSM5P40089 93 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C CAK1P43568 368 aaPredicted RBP3.95□□□□□ -1.78
PTA1YAL043C FAR7P43592 221 aa3.95□□□□□ -1.78
PTA1YAL043C MET12P46151 657 aa3.95□□□□□ -1.78
PTA1YAL043C PMT4P46971 762 aa3.95□□□□□ -1.78
PTA1YAL043C PSP1P50896 841 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C SLD3P53135 668 aa3.95□□□□□ -1.78
PTA1YAL043C NGL2Q03264 515 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C ECM11Q04110 302 aa3.95□□□□□ -1.78
PTA1YAL043C YDR109CQ04585 715 aa3.95□□□□□ -1.78
PTA1YAL043C GSF2Q04697 403 aaKnown RBP3.95□□□□□ -1.78
PTA1YAL043C PHO5P00635 467 aa3.94□□□□□ -1.78
PTA1YAL043C ATP1P07251 545 aaKnown RBP3.94□□□□□ -1.78
PTA1YAL043C SEN2P16658 377 aa3.94□□□□□ -1.78
PTA1YAL043C SGV1P23293 657 aaKnown RBP3.94□□□□□ -1.78
PTA1YAL043C PUP1P25043 261 aa3.94□□□□□ -1.78
PTA1YAL043C DMC1P25453 334 aa3.94□□□□□ -1.78
PTA1YAL043C AAR2P32357 355 aaPredicted RBP3.94□□□□□ -1.78
PTA1YAL043C DOM34P33309 386 aa3.94□□□□□ -1.78
PTA1YAL043C CBP4P37267 147 aa3.94□□□□□ -1.78
PTA1YAL043C LDB7P38210 180 aa3.94□□□□□ -1.78
PTA1YAL043C ECM8P38246 354 aa3.94□□□□□ -1.78
PTA1YAL043C SRP72P38688 640 aaKnown RBP3.94□□□□□ -1.78
PTA1YAL043C YHL012WP38709 493 aa3.94□□□□□ -1.78
PTA1YAL043C BFR1P38934 470 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
PTA1YAL043C DSS1P39112 969 aa3.94□□□□□ -1.78
PTA1YAL043C PZF1P39933 429 aa3.94□□□□□ -1.78
PTA1YAL043C RPS12P48589 143 aaKnown RBP3.94□□□□□ -1.78
PTA1YAL043C SYF2P53277 215 aaPredicted RBP3.94□□□□□ -1.78
PTA1YAL043C YNL034WP53963 612 aa3.94□□□□□ -1.78
PTA1YAL043C AAT1Q01802 451 aa3.94□□□□□ -1.78
PTA1YAL043C NUP49Q02199 472 aa3.94□□□□□ -1.78
PTA1YAL043C MRPL13Q02204 264 aa3.94□□□□□ -1.78
PTA1YAL043C EFR3Q03653 782 aaKnown RBP3.94□□□□□ -1.78
PTA1YAL043C FIN1Q03898 291 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms