RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 PBXIP1Q96AQ6 731 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 KIF1BPQ96EK5 621 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 CRBNQ96SW2 442 aa11.51□□□□□ -0.57
PHGDH-212ENST00000641247 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
PHGDH-212ENST00000641247 PTPDC1A2A3K4 754 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 TMEM221A6NGB7 291 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 M0R296 226 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 M0R2C6 588 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.57
PHGDH-212ENST00000641247 LINC00271P0C7V0 271 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 TSPY3P0CV98 308 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 TSPY8P0CW00 308 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 VCPP55072 806 aaKnown RBP11.5□□□□□ -0.57
PHGDH-212ENST00000641247 ARHGAP1Q07960 439 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 HYAL1Q12794 435 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 LY6KQ17RY6 165 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 TIGD5Q53EQ6 642 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 GIMAP6Q6P9H5 292 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 TMEM192Q8IY95 271 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 UPF3BQ9BZI7 483 aaKnown RBP11.5□□□□□ -0.57
PHGDH-212ENST00000641247 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
PHGDH-212ENST00000641247 ADD3Q9UEY8 706 aaKnown RBP11.5□□□□□ -0.57
PHGDH-212ENST00000641247 GTF2IRD1Q9UHL9 959 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 CTNNA3Q9UI47 895 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 MTMR7Q9Y216 660 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 MYH8P13535 1937 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 PLIN4Q96Q06 1357 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 TECTAO75443 2155 aa11.5□□□□□ -0.57
PHGDH-212ENST00000641247 TANC1Q9C0D5 1861 aa11.49□□□□□ -0.57
PHGDH-212ENST00000641247 TBX10O75333 385 aa11.49□□□□□ -0.57
PHGDH-212ENST00000641247 RPS6P62753 249 aaKnown RBP11.49□□□□□ -0.57
PHGDH-212ENST00000641247 PTPROQ16827 1216 aa11.49□□□□□ -0.57
PHGDH-212ENST00000641247 FBXO11Q86XK2 927 aa11.49□□□□□ -0.57
PHGDH-212ENST00000641247 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
PHGDH-212ENST00000641247 SCFD2Q8WU76 684 aa11.49□□□□□ -0.57
PHGDH-212ENST00000641247 TBC1D5Q92609 795 aa11.49□□□□□ -0.57
PHGDH-212ENST00000641247 ALG1Q9BT22 464 aa11.49□□□□□ -0.57
PHGDH-212ENST00000641247 LOC102724159A0A0B4J2E5 919 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-212ENST00000641247 STXBP3O00186 592 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 GRM6O15303 877 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 GPAA1O43292 621 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 RGS20O76081 388 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 UPP2O95045 317 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 ZXDAP98168 799 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 PDE4BQ07343 736 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 PDE4DQ08499 809 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 PWP2Q15269 919 aaKnown RBP11.48□□□□□ -0.57
PHGDH-212ENST00000641247 BRDTQ58F21 947 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-212ENST00000641247 HSP90AB4PQ58FF6 505 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 RNF207Q6ZRF8 634 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 CHST3Q7LGC8 479 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 CCDC155Q8N6L0 562 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 PANK1Q8TE04 598 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 TOP1MTQ969P6 601 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 SEC62Q99442 399 aaKnown RBP11.48□□□□□ -0.57
PHGDH-212ENST00000641247 STX8Q9UNK0 236 aa11.48□□□□□ -0.57
PHGDH-212ENST00000641247 PATL2C9JE40 543 aaKnown RBP11.47□□□□□ -0.57
PHGDH-212ENST00000641247 HAS3O00219 553 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 SMARCA5O60264 1052 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-212ENST00000641247 EFCAB14O75071 495 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 CSPG5O95196 566 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 PARNO95453 639 aaKnown RBP11.47□□□□□ -0.57
PHGDH-212ENST00000641247 AMHP03971 560 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 NOVP48745 357 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 TDO2P48775 406 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 PSEN2P49810 448 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 PTK7Q13308 1070 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 CAMK1Q14012 370 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 PLEKHG4Q58EX7 1191 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 C20orf194Q5TEA3 1177 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 BTNL9Q6UXG8 535 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 SEPT14Q6ZU15 432 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 ASCL5Q7RTU5 278 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 FTSJ3Q8IY81 847 aaKnown RBP11.47□□□□□ -0.57
PHGDH-212ENST00000641247 IGFLR1Q9H665 355 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 FAM50BQ9Y247 325 aa11.47□□□□□ -0.57
PHGDH-212ENST00000641247 SIP14410 1827 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 FRMPD2Q68DX3 1309 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-212ENST00000641247 RAD50Q92878 1312 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 H0Y858 1186 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 FOXP2O15409 715 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 APPP05067 770 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 ZNF286BP0CG31 522 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 MS4A1P11836 297 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 AVPR2P30518 371 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 FOXK2Q01167 660 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 PPARAQ07869 468 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 SMAD4Q13485 552 aaKnown RBP11.46□□□□□ -0.57
PHGDH-212ENST00000641247 MFSD10Q14728 455 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 SYDE2Q5VT97 1194 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 ZSCAN25Q6NSZ9 544 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 FBXL6Q8N531 539 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 C7orf31Q8N865 590 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 APPBP2Q92624 585 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 ATOH1Q92858 354 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-212ENST00000641247 ASIC4Q96FT7 647 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 MSLNLQ96KJ4 702 aa11.46□□□□□ -0.57
PHGDH-212ENST00000641247 SAMD11Q96NU1 681 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms