RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CCPG1Q9ULG6 757 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 RWDD3Q9Y3V2 267 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 SLC4A4Q9Y6R1 1079 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
PTP4A1-207ENST00000639568 FAM186AA6NE01 2351 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 TET1Q8NFU7 2136 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 GRM6O15303 877 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 RGS20O76081 388 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 TTLL1O95922 423 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 ICAM3P32942 547 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 GTF2F1P35269 517 aaKnown RBP eCLIP13.09□□□□□ -0.312e-11■■□□□ 12.8
PTP4A1-207ENST00000639568 BAATQ14032 418 aaPredicted RBP13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 PTPN21Q16825 1174 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 ZNF444Q8N0Y2 327 aaPredicted RBP13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 SMRP1Q8NCR6 262 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 COPS5Q92905 334 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 IL17RAQ96F46 866 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 MSLNLQ96KJ4 702 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 CNTNAP3BQ96NU0 1288 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 PHF7Q9BWX1 381 aaPredicted RBP13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 IFIH1Q9BYX4 1025 aaKnown RBP13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 CNTNAP3Q9BZ76 1288 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 ARPP21Q9UBL0 812 aaPredicted RBP13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 MYO5AQ9Y4I1 1855 aaKnown RBP13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
PTP4A1-207ENST00000639568 GVINP1Q7Z2Y8 2422 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 PTPDC1A2A3K4 754 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 C5orf67F2Z3F1 127 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 CASTP20810 708 aaKnown RBP13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 BMPR1AP36894 532 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 SLC1A4P43007 532 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 RRP1P56182 461 aaKnown RBP13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 SNAP25P60880 206 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 ATP8B2P98198 1209 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 RMDN1Q96DB5 314 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 USP15Q9Y4E8 981 aaPredicted RBP13.08□□□□□ -0.32
PTP4A1-207ENST00000639568 RSPH10B2B2RC85 870 aa13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 B4DLN1 442 aa13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 IPO8O15397 1037 aaKnown RBP13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 PDGFBP01127 241 aaPredicted RBP13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 RSPH10BP0C881 870 aa13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 COASYQ13057 564 aa13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 MBTPS1Q14703 1052 aa13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 SEPT8Q92599 483 aa13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 CHMP4CQ96CF2 233 aa13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 HDAC6Q9UBN7 1215 aa13.07□□□□□ -0.32
PTP4A1-207ENST00000639568 ZFHX4Q86UP3 3567 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 NCOR2Q9Y618 2525 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 PTPRSQ13332 1948 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 MINDY4BA8MYZ0 360 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 MMP3P08254 477 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 CALML3P27482 149 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 ADD2P35612 726 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 THPOP40225 353 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 DGKDQ16760 1214 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 PLEKHG4Q58EX7 1191 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 TRAF7Q6Q0C0 670 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 ERC1Q8IUD2 1116 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 GMCL1Q96IK5 515 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 KATNAL1Q9BW62 490 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 CLEC1BQ9P126 229 aa13.06□□□□□ -0.32
PTP4A1-207ENST00000639568 KMT2BQ9UMN6 2715 aaPredicted RBP13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 GH1P01241 217 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 MMP1P03956 469 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 ICAM1P05362 532 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 MCCP23508 829 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 PUM1Q14671 1186 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 TRIM71Q2Q1W2 868 aaKnown RBP13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 SLFNL1Q499Z3 407 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 EFHBQ8N7U6 833 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 KAT2BQ92831 832 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 ZNF292O60281 2723 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 DMXL1Q9Y485 3027 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 SCN10AQ9Y5Y9 1956 aa13.05□□□□□ -0.32
PTP4A1-207ENST00000639568 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 PLA2G6O60733 806 aa13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 PSEN2P49810 448 aa13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 KCTD1Q719H9 257 aa13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 TMEM105Q8N8V8 129 aa13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 PRR12Q9ULL5 1215 aa13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 BARX2Q9UMQ3 279 aaPredicted RBP13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
PTP4A1-207ENST00000639568 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
PTP4A1-207ENST00000639568 NFIBO00712 420 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms