RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 SHISA4Q96DD7 197 aa9.68□□□□□ -0.86
LINC01108-202ENST00000635227 SRPK1Q96SB4 655 aaKnown RBP9.68□□□□□ -0.86
LINC01108-202ENST00000635227 LNPKQ9C0E8 428 aa9.68□□□□□ -0.86
LINC01108-202ENST00000635227 PFDN2Q9UHV9 154 aa9.68□□□□□ -0.86
LINC01108-202ENST00000635227 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.68□□□□□ -0.86
LINC01108-202ENST00000635227 KDM5CP41229 1560 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 ZNF518AQ6AHZ1 1483 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 ERBINQ96RT1 1412 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 THBDP07204 575 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 TMEM67Q5HYA8 995 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 HLA-DQA1Q5Y7H0 255 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 KSR1Q8IVT5 923 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 MKL1Q969V6 931 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 SGSM3Q96HU1 749 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 CLEC1BQ9P126 229 aa9.67□□□□□ -0.86
LINC01108-202ENST00000635227 EIF2AK4Q9P2K8 1649 aaKnown RBP9.67□□□□□ -0.86
LINC01108-202ENST00000635227 FAM135AQ9P2D6 1515 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 EP400Q96L91 3159 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 STRCP1A6NGW2 1772 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 A0A1W2PQ45 241 aaPredicted RBP9.66□□□□□ -0.86
LINC01108-202ENST00000635227 A0A1W2PQY0 241 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 IQCA1LA6NCM1 817 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 ZNF503-AS2A6NEH8 195 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.66□□□□□ -0.86
LINC01108-202ENST00000635227 DIAPH1O60610 1272 aaKnown RBP9.66□□□□□ -0.86
LINC01108-202ENST00000635227 TBC1D8O95759 1140 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 GLI1P08151 1106 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 SNRPB2P08579 225 aaKnown RBP9.66□□□□□ -0.86
LINC01108-202ENST00000635227 PLS3P13797 630 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 HOXC12P31275 282 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 ECI1P42126 302 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 PRSS53Q2L4Q9 553 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 NLRX1Q86UT6 975 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 SIRT2Q8IXJ6 389 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 ZNF669Q96BR6 464 aaPredicted RBP9.66□□□□□ -0.86
LINC01108-202ENST00000635227 ARHGEF4Q9NR80 690 aa9.66□□□□□ -0.86
LINC01108-202ENST00000635227 NPATQ14207 1427 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 WTIPA6NIX2 430 aaPredicted RBP9.65□□□□□ -0.86
LINC01108-202ENST00000635227 GFRA1P56159 465 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 C1QTNF8P60827 252 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 LAPTM5Q13571 262 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 BMS1Q14692 1282 aaKnown RBP9.65□□□□□ -0.86
LINC01108-202ENST00000635227 LRP10Q7Z4F1 713 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 CPNE8Q86YQ8 564 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 FRS2Q8WU20 508 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 ASIC4Q96FT7 647 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 LIN37Q96GY3 246 aaPredicted RBP9.65□□□□□ -0.86
LINC01108-202ENST00000635227 SPATA9Q9BWV2 254 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 USP35Q9P2H5 1018 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 IMPACTQ9P2X3 320 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 TAF6LQ9Y6J9 622 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 NEURL4Q96JN8 1562 aa9.65□□□□□ -0.86
LINC01108-202ENST00000635227 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.87
LINC01108-202ENST00000635227 NUP155O75694 1391 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 CEP170BQ9Y4F5 1589 aaPredicted RBP9.64□□□□□ -0.87
LINC01108-202ENST00000635227 SCG5P05408 212 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 PAMP19021 973 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 KCNJ6P48051 423 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 SSRP1Q08945 709 aaKnown RBP9.64□□□□□ -0.87
LINC01108-202ENST00000635227 HSP90AA2PQ14568 343 aaPredicted RBP9.64□□□□□ -0.87
LINC01108-202ENST00000635227 SNX17Q15036 470 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 CCDC144BQ3MJ40 725 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 YOD1Q5VVQ6 348 aaPredicted RBP9.64□□□□□ -0.87
LINC01108-202ENST00000635227 GALNT18Q6P9A2 607 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 JAMLQ86YT9 394 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 LRRC47Q8N1G4 583 aaKnown RBP9.64□□□□□ -0.87
LINC01108-202ENST00000635227 TMEM145Q8NBT3 493 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 NPLOC4Q8TAT6 608 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 DNAJC7Q99615 494 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 IER2Q9BTL4 223 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 RGS12O14924 1447 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 NHSL1Q5SYE7 1610 aa9.64□□□□□ -0.87
LINC01108-202ENST00000635227 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
LINC01108-202ENST00000635227 NPHP3-ACAD11A0A0J9YXS1 232 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 ARNTLO00327 626 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 ADCY3O60266 1144 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 PRKCAP17252 672 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 IFRD2Q12894 506 aaPredicted RBP9.63□□□□□ -0.87
LINC01108-202ENST00000635227 MBLAC2Q68D91 279 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 AFAP1Q8N556 730 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 KREMEN2Q8NCW0 462 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 YTHDC1Q96MU7 727 aaKnown RBP9.63□□□□□ -0.87
LINC01108-202ENST00000635227 AARSD1Q9BTE6 412 aaKnown RBP9.63□□□□□ -0.87
LINC01108-202ENST00000635227 ZSWIM4Q9H7M6 989 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 CWC22Q9HCG8 908 aaKnown RBP9.63□□□□□ -0.87
LINC01108-202ENST00000635227 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.63□□□□□ -0.87
LINC01108-202ENST00000635227 YBX2Q9Y2T7 364 aaKnown RBP9.63□□□□□ -0.87
LINC01108-202ENST00000635227 RTEL1-TNFRSF6BF6WH68 1400 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 DEPDC5O75140 1603 aa9.63□□□□□ -0.87
LINC01108-202ENST00000635227 MLH3Q9UHC1 1453 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 ANP32CO43423 234 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 MSL3P1P0C860 447 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 L1CAMP32004 1257 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 DENND5AQ6IQ26 1287 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 DPH6Q7L8W6 267 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 NUP43Q8NFH3 380 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 C1orf159Q96HA4 380 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 CCDC140Q96MF4 163 aa9.62□□□□□ -0.87
LINC01108-202ENST00000635227 TMEFF2Q9UIK5 374 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms