RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 SSPNQ14714 243 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 INF2Q27J81 1249 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 MTERF2Q49AM1 385 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 NSMFQ6X4W1 530 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 SPOCD1Q6ZMY3 1216 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 SCUBE1Q8IWY4 988 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 SP8Q8IXZ3 490 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 RCBTB1Q8NDN9 531 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 PHOSPHO1Q8TCT1 267 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 DPF3Q92784 378 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 PWWP2AQ96N64 755 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 IER2Q9BTL4 223 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 SPATA9Q9BWV2 254 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 BTG4Q9NY30 223 aa5.13□□□□□ -1.59
SRP54-214ENST00000630962 HGSO14964 777 aaPredicted RBP5.12□□□□□ -1.59
SRP54-214ENST00000630962 TBX1O43435 398 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 PPP1R11O60927 126 aaPredicted RBP5.12□□□□□ -1.59
SRP54-214ENST00000630962 CYP2C8P10632 490 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 PABPC1P11940 636 aaKnown RBP5.12□□□□□ -1.59
SRP54-214ENST00000630962 BCL6P41182 706 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 FOXO4P98177 505 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 CYP4F3Q08477 520 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 KIZQ2M2Z5 673 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 ERICH6BQ5W0A0 696 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 MBLAC2Q68D91 279 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 ETV3LQ6ZN32 361 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 TRIM48Q8IWZ4 208 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 TMEFF1Q8IYR6 380 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 LINC01356Q8N9X3 169 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 C1orf159Q96HA4 380 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 CDC6Q99741 560 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 CLDND1Q9NY35 253 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 ZNF652Q9Y2D9 606 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 PCDHA2Q9Y5H9 948 aa5.12□□□□□ -1.59
SRP54-214ENST00000630962 CCDC163A0A0D9SF12 145 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 PRODHO43272 600 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 DLX3O60479 287 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 PMLP29590 882 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 SSRP1Q08945 709 aaKnown RBP5.11□□□□□ -1.59
SRP54-214ENST00000630962 LCNL1Q6ZST4 164 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 USP53Q70EK8 1073 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 MAMDC2Q7Z304 686 aaPredicted RBP5.11□□□□□ -1.59
SRP54-214ENST00000630962 MILR1Q7Z6M3 343 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 MIB1Q86YT6 1006 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 CCDC103Q8IW40 242 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 TEX2Q8IWB9 1127 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 IFNL3Q8IZI9 196 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.11□□□□□ -1.59
SRP54-214ENST00000630962 YIPF4Q9BSR8 244 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 LGR4Q9BXB1 951 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 PMF1-BGLAPU3KQ54 211 aa5.11□□□□□ -1.59
SRP54-214ENST00000630962 AQP7O14520 342 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 CYP7B1O75881 506 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 GPR85P60893 370 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 SUMO1P63165 101 aaKnown RBP5.1□□□□□ -1.59
SRP54-214ENST00000630962 SPIRE1Q08AE8 756 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 SF1Q15637 639 aaKnown RBP5.1□□□□□ -1.59
SRP54-214ENST00000630962 EMC4Q5J8M3 183 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 STYK1Q6J9G0 422 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 TTLL7Q6ZT98 887 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 FAM126BQ8IXS8 530 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 ZBTB38Q8NAP3 1195 aaPredicted RBP5.1□□□□□ -1.59
SRP54-214ENST00000630962 PANK1Q8TE04 598 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 SREK1Q8WXA9 508 aaKnown RBP5.1□□□□□ -1.59
SRP54-214ENST00000630962 WRNIP1Q96S55 665 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 ALG1Q9BT22 464 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 SMOC1Q9H4F8 434 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 LUC7LQ9NQ29 371 aaKnown RBP5.1□□□□□ -1.59
SRP54-214ENST00000630962 ARHGEF4Q9NR80 690 aa5.1□□□□□ -1.59
SRP54-214ENST00000630962 TMEFF2Q9UIK5 374 aaPredicted RBP5.1□□□□□ -1.59
SRP54-214ENST00000630962 SMARCA5O60264 1052 aaPredicted RBP5.09□□□□□ -1.59
SRP54-214ENST00000630962 GRIA2P42262 883 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 NCKAP1LP55160 1127 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 NKX3-2P78367 333 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 NFE2L2Q16236 605 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 PRSS53Q2L4Q9 553 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 STEAP3Q658P3 488 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 TTLL6Q8N841 843 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 MARCH10Q8NA82 808 aaPredicted RBP5.09□□□□□ -1.59
SRP54-214ENST00000630962 PHF20Q9BVI0 1012 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 ZCCHC4Q9H5U6 513 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 EPB41L4AQ9HCS5 686 aaPredicted RBP5.09□□□□□ -1.59
SRP54-214ENST00000630962 PARD6AQ9NPB6 346 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 PALD1Q9ULE6 856 aa5.09□□□□□ -1.59
SRP54-214ENST00000630962 SH3D21A4FU49 640 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 FAM47E-STBD1D6RA91 191 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 GSTA4O15217 222 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 SGSM2O43147 1006 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 ATF2P15336 505 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 FPR2P25090 351 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 HTRA3P83110 453 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 SERINC3Q13530 473 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 DENND5AQ6IQ26 1287 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 LBX2Q6XYB7 198 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 TTLL10Q6ZVT0 673 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 SAPCD2Q86UD0 394 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 LINC00482Q8N8I6 264 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 SMARCC2Q8TAQ2 1214 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 FNIP1Q8TF40 1166 aa5.08□□□□□ -1.6
SRP54-214ENST00000630962 PTPRN2Q92932 1015 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms