RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 BANK1Q8NDB2 785 aa17.35■□□□□ 0.37
RANBP3-208ENST00000587263 GTF2IRD1Q9UHL9 959 aa17.35■□□□□ 0.37
RANBP3-208ENST00000587263 C19orf67A6NJJ6 358 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 ARIH2O95376 493 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 GH1P01241 217 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 AMHP03971 560 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 CASTP20810 708 aaKnown RBP17.34■□□□□ 0.37
RANBP3-208ENST00000587263 RPS6P62753 249 aaKnown RBP17.34■□□□□ 0.37
RANBP3-208ENST00000587263 TCTN1Q2MV58 587 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 EP400NLQ6ZTU2 488 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 SP7Q8TDD2 431 aaPredicted RBP17.34■□□□□ 0.37
RANBP3-208ENST00000587263 AFG1LQ8WV93 481 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 CLEC4DQ8WXI8 215 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 GPATCH3Q96I76 525 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 DDX19BQ9UMR2 479 aa17.34■□□□□ 0.37
RANBP3-208ENST00000587263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.34■□□□□ 0.372e-6■■■□□ 14.9
RANBP3-208ENST00000587263 SLC16A2P36021 539 aa17.33■□□□□ 0.36
RANBP3-208ENST00000587263 HTRA4P83105 476 aaPredicted RBP17.33■□□□□ 0.36
RANBP3-208ENST00000587263 PTK7Q13308 1070 aa17.33■□□□□ 0.36
RANBP3-208ENST00000587263 COL19A1Q14993 1142 aa17.33■□□□□ 0.36
RANBP3-208ENST00000587263 EPC2Q52LR7 807 aa17.33■□□□□ 0.36
RANBP3-208ENST00000587263 TTBK2Q6IQ55 1244 aa17.33■□□□□ 0.36
RANBP3-208ENST00000587263 C7orf31Q8N865 590 aa17.33■□□□□ 0.36
RANBP3-208ENST00000587263 POP1Q99575 1024 aaKnown RBP17.33■□□□□ 0.36
RANBP3-208ENST00000587263 IL17RBQ9NRM6 502 aa17.33■□□□□ 0.36
RANBP3-208ENST00000587263 ZBTB40Q9NUA8 1239 aa17.33■□□□□ 0.36
RANBP3-208ENST00000587263 EMSYQ7Z589 1322 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 WDR19Q8NEZ3 1342 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 NMT2O60551 498 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 LGR5O75473 907 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 IRS1P35568 1242 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 CCDC62Q6P9F0 684 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 MYOCDQ8IZQ8 938 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 KAT2BQ92831 832 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 KATNAL1Q9BW62 490 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 NSUN3Q9H649 340 aaKnown RBP17.32■□□□□ 0.36
RANBP3-208ENST00000587263 HDAC6Q9UBN7 1215 aa17.32■□□□□ 0.36
RANBP3-208ENST00000587263 H3BNC9 293 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 NCK2O43639 380 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 ST18O60284 1047 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 NOVP48745 357 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 ARHGAP1Q07960 439 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 GPM6BQ13491 265 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 DGKDQ16760 1214 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 ZNF618Q5T7W0 954 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.31■□□□□ 0.36
RANBP3-208ENST00000587263 CHMP4BQ9H444 224 aaKnown RBP17.31■□□□□ 0.36
RANBP3-208ENST00000587263 CLDND1Q9NY35 253 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 WDFY4Q6ZS81 3184 aa17.31■□□□□ 0.36
RANBP3-208ENST00000587263 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
RANBP3-208ENST00000587263 PSEN2P49810 448 aa17.3■□□□□ 0.36
RANBP3-208ENST00000587263 PTPN5P54829 565 aa17.3■□□□□ 0.36
RANBP3-208ENST00000587263 TRIM71Q2Q1W2 868 aaKnown RBP17.3■□□□□ 0.36
RANBP3-208ENST00000587263 HERC4Q5GLZ8 1057 aaPredicted RBP17.3■□□□□ 0.36
RANBP3-208ENST00000587263 TRAF7Q6Q0C0 670 aa17.3■□□□□ 0.36
RANBP3-208ENST00000587263 CHST3Q7LGC8 479 aa17.3■□□□□ 0.36
RANBP3-208ENST00000587263 YME1L1Q96TA2 773 aa17.3■□□□□ 0.36
RANBP3-208ENST00000587263 GPCPD1Q9NPB8 672 aa17.3■□□□□ 0.36
RANBP3-208ENST00000587263 FRMPD2Q68DX3 1309 aaPredicted RBP17.29■□□□□ 0.36
RANBP3-208ENST00000587263 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
RANBP3-208ENST00000587263 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
RANBP3-208ENST00000587263 MBTPS1Q14703 1052 aa17.29■□□□□ 0.36
RANBP3-208ENST00000587263 LY6KQ17RY6 165 aa17.29■□□□□ 0.36
RANBP3-208ENST00000587263 RPAINQ86UA6 219 aa17.29■□□□□ 0.36
RANBP3-208ENST00000587263 FBXO11Q86XK2 927 aa17.29■□□□□ 0.36
RANBP3-208ENST00000587263 DBF4BQ8NFT6 615 aa17.29■□□□□ 0.36
RANBP3-208ENST00000587263 PRRX2Q99811 253 aa17.29■□□□□ 0.36
RANBP3-208ENST00000587263 ALG1Q9BT22 464 aa17.29■□□□□ 0.36
RANBP3-208ENST00000587263 COL4A6Q14031 1691 aa17.29■□□□□ 0.36
RANBP3-208ENST00000587263 F2P00734 622 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 TOP1P11387 765 aaKnown RBP17.28■□□□□ 0.36
RANBP3-208ENST00000587263 CTDSPL2Q05D32 466 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 MFSD10Q14728 455 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 SMAD2Q15796 467 aaKnown RBP17.28■□□□□ 0.36
RANBP3-208ENST00000587263 PKN1Q16512 942 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 KIAA0753Q2KHM9 967 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 SEPT14Q6ZU15 432 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 TMEM192Q8IY95 271 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 RGS22Q8NE09 1264 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 ANKS1AQ92625 1134 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
RANBP3-208ENST00000587263 MAF1Q9H063 256 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 MUTYHQ9UIF7 546 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 MICAL3Q7RTP6 2002 aa17.28■□□□□ 0.36
RANBP3-208ENST00000587263 HAS3O00219 553 aa17.27■□□□□ 0.36
RANBP3-208ENST00000587263 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
RANBP3-208ENST00000587263 PRSS33Q8NF86 280 aa17.27■□□□□ 0.36
RANBP3-208ENST00000587263 WNT8BQ93098 351 aa17.27■□□□□ 0.36
RANBP3-208ENST00000587263 EMID1Q96A84 441 aaPredicted RBP17.27■□□□□ 0.36
RANBP3-208ENST00000587263 PHOX2BQ99453 314 aa17.27■□□□□ 0.36
RANBP3-208ENST00000587263 RSPH10B2B2RC85 870 aa17.26■□□□□ 0.35
RANBP3-208ENST00000587263 ORC4O43929 436 aa17.26■□□□□ 0.35
RANBP3-208ENST00000587263 RSPH10BP0C881 870 aa17.26■□□□□ 0.35
RANBP3-208ENST00000587263 STXBP2Q15833 593 aa17.26■□□□□ 0.35
RANBP3-208ENST00000587263 PLEKHG4Q58EX7 1191 aa17.26■□□□□ 0.35
RANBP3-208ENST00000587263 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
RANBP3-208ENST00000587263 RNF135Q8IUD6 432 aa17.26■□□□□ 0.35
RANBP3-208ENST00000587263 DHX37Q8IY37 1157 aaKnown RBP17.26■□□□□ 0.35
RANBP3-208ENST00000587263 NSUN6Q8TEA1 469 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms