RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 WASF1Q92558 559 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 ALG1Q9BT22 464 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 WDR11Q9BZH6 1224 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 KCNJ14Q9UNX9 436 aa13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 GNEQ9Y223 722 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-218ENST00000560777 PGK1P00558 417 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 PTGS1P23219 599 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 RGS19P49795 217 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 AP3B2Q13367 1082 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 DUSP28Q4G0W2 176 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 CCDC62Q6P9F0 684 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 REXO1Q8N1G1 1221 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 BICD2Q8TD16 824 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 SCFD2Q8WU76 684 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 PGBD1Q96JS3 809 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 PHF20Q9BVI0 1012 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 ANO3Q9BYT9 981 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 XPNPEP3Q9NQH7 507 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 PCDHA4Q9UN74 947 aa13.68□□□□□ -0.22
RABGGTA-218ENST00000560777 M0R2N6 131 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 ADAMTS4O75173 837 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 ARIH2O95376 493 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 TXNP10599 105 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 IRX5P78411 483 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 GJC2Q5T442 439 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 MCTP2Q6DN12 878 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 GALNT17Q6IS24 598 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 UBE2Q1Q7Z7E8 422 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 ANKLE1Q8NAG6 615 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 DAGLBQ8NCG7 672 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 ARRDC4Q8NCT1 418 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 RASGRP4Q8TDF6 673 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 DDX41Q9UJV9 622 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 Q9Y3F1 56 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 LRRC37A2A6NM11 1700 aa13.67□□□□□ -0.22
RABGGTA-218ENST00000560777 CTAGE5O15320 804 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 STAM2O75886 525 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 XBP1P17861 261 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 ITGB5P18084 799 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 SREBF1P36956 1147 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 GJA9P57773 515 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 NKX3-2P78367 333 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 TTLL4Q14679 1199 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 LRRC41Q15345 812 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 LY6KQ17RY6 165 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 BLIDQ8IZY5 108 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 KLHDC9Q8NEP7 349 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 CRYGNQ8WXF5 182 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 COPS5Q92905 334 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 UPF3AQ9H1J1 476 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 EHMT1Q9H9B1 1298 aa13.66□□□□□ -0.22
RABGGTA-218ENST00000560777 SYNRGQ9UMZ2 1314 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 MKI67P46013 3256 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 MYADML2A6NDP7 307 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 SPATA31C2B4DYI2 1134 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 DNM1LO00429 736 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 EDIL3O43854 480 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 FARP2O94887 1054 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 TGFB3P10600 412 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 ICAM3P32942 547 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 HMGN5P82970 282 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 ARHGAP4P98171 946 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 SP2Q02086 613 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 SEMA3FQ13275 785 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 CCSAPQ6IQ19 270 aaPredicted RBP13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 KCNV1Q6PIU1 500 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 RNF180Q86T96 592 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 TLK2Q86UE8 772 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 CYP2W1Q8TAV3 490 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 OXER1Q8TDS5 423 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 UBIAD1Q9Y5Z9 338 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 MRVI1Q9Y6F6 885 aa13.65□□□□□ -0.22
RABGGTA-218ENST00000560777 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 NKRFO15226 690 aaKnown RBP eCLIP13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 CYP3A4P08684 503 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 C6orf222P0C671 652 aaPredicted RBP13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 COL6A1P12109 1028 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 BEX3Q00994 111 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 CUL4AQ13619 759 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 KCNA10Q16322 511 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 GNASQ5JWF2 1037 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 KRT40Q6A162 431 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 NLRX1Q86UT6 975 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 SNX21Q969T3 373 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 MXRA8Q9BRK3 442 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 AP5M1Q9H0R1 490 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 BCAS3Q9H6U6 928 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 SPC25Q9HBM1 224 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 JADE2Q9NQC1 790 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 FRMPD3Q5JV73 1810 aa13.64□□□□□ -0.23
RABGGTA-218ENST00000560777 MEIS1O00470 390 aa13.63□□□□□ -0.23
RABGGTA-218ENST00000560777 FIBPO43427 364 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms