RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 TROAPQ12815 778 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 TMEM67Q5HYA8 995 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 USP38Q8NB14 1042 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 IL31RAQ8NI17 732 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 KAT2BQ92831 832 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 PDCD2LQ9BRP1 358 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 MSRAQ9UJ68 235 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 NOD1Q9Y239 953 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 RBM8AQ9Y5S9 174 aaKnown RBP16.62■□□□□ 0.25
TROAP-203ENST00000546735 MRVI1Q9Y6F6 885 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 SLC4A7Q9Y6M7 1214 aa16.62■□□□□ 0.25
TROAP-203ENST00000546735 SCN10AQ9Y5Y9 1956 aa16.61■□□□□ 0.25
TROAP-203ENST00000546735 RGS20O76081 388 aa16.61■□□□□ 0.25
TROAP-203ENST00000546735 MYOGP15173 224 aa16.61■□□□□ 0.25
TROAP-203ENST00000546735 GHRHRQ02643 423 aa16.61■□□□□ 0.25
TROAP-203ENST00000546735 PTPN11Q06124 597 aaPredicted RBP16.61■□□□□ 0.25
TROAP-203ENST00000546735 RAB30Q15771 203 aa16.61■□□□□ 0.25
TROAP-203ENST00000546735 PTGISQ16647 500 aa16.61■□□□□ 0.25
TROAP-203ENST00000546735 FCHSD1Q86WN1 690 aa16.61■□□□□ 0.25
TROAP-203ENST00000546735 MB21D2Q8IYB1 491 aaPredicted RBP16.61■□□□□ 0.25
TROAP-203ENST00000546735 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
TROAP-203ENST00000546735 CASTP20810 708 aaKnown RBP16.6■□□□□ 0.25
TROAP-203ENST00000546735 COL9A3Q14050 684 aaPredicted RBP16.6■□□□□ 0.25
TROAP-203ENST00000546735 PGM5Q15124 567 aa16.6■□□□□ 0.25
TROAP-203ENST00000546735 GDF6Q6KF10 455 aaPredicted RBP16.6■□□□□ 0.25
TROAP-203ENST00000546735 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
TROAP-203ENST00000546735 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
TROAP-203ENST00000546735 PPM1EQ8WY54 764 aa16.6■□□□□ 0.25
TROAP-203ENST00000546735 ALG1Q9BT22 464 aa16.6■□□□□ 0.25
TROAP-203ENST00000546735 MYL10Q9BUA6 226 aa16.6■□□□□ 0.25
TROAP-203ENST00000546735 UNC80Q8N2C7 3258 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 GCOM1H8Y6P7 765 aaPredicted RBP16.59■□□□□ 0.25
TROAP-203ENST00000546735 POLR2MP0CAP2 368 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 ZNF286BP0CG31 522 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 PSEN2P49810 448 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 ADGRE1Q14246 886 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 SART3Q15020 963 aaKnown RBP16.59■□□□□ 0.25
TROAP-203ENST00000546735 CATIPQ7Z7H3 387 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 VSIG10LQ86VR7 867 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 DHX37Q8IY37 1157 aaKnown RBP16.59■□□□□ 0.25
TROAP-203ENST00000546735 GPKOWQ92917 476 aaPredicted RBP eCLIP16.59■□□□□ 0.25
TROAP-203ENST00000546735 CTAGE1Q96RT6 745 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 GAS2L1Q99501 681 aaPredicted RBP16.59■□□□□ 0.25
TROAP-203ENST00000546735 SLC28A3Q9HAS3 691 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 PRDM6Q9NQX0 595 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 EYSQ5T1H1 3165 aa16.59■□□□□ 0.25
TROAP-203ENST00000546735 MYH6P13533 1939 aa16.58■□□□□ 0.25
TROAP-203ENST00000546735 PNMA6FA0A0J9YX94 578 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 PITPNM1O00562 1244 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 PFKMP08237 780 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 ATP2A2P16615 1042 aaKnown RBP16.58■□□□□ 0.24
TROAP-203ENST00000546735 SP2Q02086 613 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 BFSP2Q13515 415 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 LAMC2Q13753 1193 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 DGKDQ16760 1214 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 DHX38Q92620 1227 aaKnown RBP16.58■□□□□ 0.24
TROAP-203ENST00000546735 EMID1Q96A84 441 aaPredicted RBP16.58■□□□□ 0.24
TROAP-203ENST00000546735 FTOQ9C0B1 505 aaKnown RBP eCLIP16.58■□□□□ 0.24
TROAP-203ENST00000546735 LY9Q9HBG7 655 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 MAP3K20Q9NYL2 800 aaKnown RBP16.58■□□□□ 0.24
TROAP-203ENST00000546735 HDAC6Q9UBN7 1215 aa16.58■□□□□ 0.24
TROAP-203ENST00000546735 SCN5AQ14524 2016 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 GGPS1O95749 300 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 IGFBP4P22692 258 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 MFSD10Q14728 455 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 HSDL1Q3SXM5 330 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 MYSM1Q5VVJ2 828 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 SESTD1Q86VW0 696 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 PPTC7Q8NI37 304 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 LSG1Q9H089 658 aaKnown RBP16.57■□□□□ 0.24
TROAP-203ENST00000546735 BCAS3Q9H6U6 928 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 GTF2IRD1Q9UHL9 959 aa16.57■□□□□ 0.24
TROAP-203ENST00000546735 PRC1O43663 620 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 ACTN1P12814 892 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 RXRAP19793 462 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 UBA1P22314 1058 aaKnown RBP16.56■□□□□ 0.24
TROAP-203ENST00000546735 CCND2P30279 289 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 RFC2P35250 354 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
TROAP-203ENST00000546735 GPNMBQ14956 572 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 CCDC85BQ15834 202 aaPredicted RBP16.56■□□□□ 0.24
TROAP-203ENST00000546735 KIAA0753Q2KHM9 967 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 CELF3Q5SZQ8 465 aaKnown RBP16.56■□□□□ 0.24
TROAP-203ENST00000546735 PPP2R2DQ66LE6 453 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 RAB11FIP4Q86YS3 637 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 CMTR1Q8N1G2 835 aaKnown RBP16.56■□□□□ 0.24
TROAP-203ENST00000546735 C7orf31Q8N865 590 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 SPATA33Q96N06 139 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 PCDHA11Q9Y5I1 949 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 KIAA1217Q5T5P2 1943 aa16.56■□□□□ 0.24
TROAP-203ENST00000546735 GBF1Q92538 1859 aa16.55■□□□□ 0.24
TROAP-203ENST00000546735 HAS3O00219 553 aa16.55■□□□□ 0.24
TROAP-203ENST00000546735 SLC27A2O14975 620 aa16.55■□□□□ 0.24
TROAP-203ENST00000546735 PLEKHA8P1O95397 391 aa16.55■□□□□ 0.24
TROAP-203ENST00000546735 F2P00734 622 aa16.55■□□□□ 0.24
TROAP-203ENST00000546735 TRAF1Q13077 416 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms