RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 C1orf167Q5SNV9 1468 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 NRXN3Q9Y4C0 1643 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 CFBP00751 764 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 SERPING1P05155 500 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 GCFC2P16383 781 aaKnown RBP9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 CLUL1Q15846 466 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 MAEAQ7L5Y9 396 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 FAM133AQ8N9E0 248 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 GJA10Q969M2 543 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 FUT8Q9BYC5 575 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 EMILIN3Q9NT22 766 aa9.01□□□□□ -0.97
PRKAB1-207ENST00000542698 PVALEFA0A1B0GWK0 134 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 FAM170AA1A519 330 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 ATP2A1O14983 1001 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 DESP17661 470 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 GJC1P36383 396 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 CDK8P49336 464 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 CYP4A11Q02928 519 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 SF3A3Q12874 501 aaKnown RBP eCLIP9□□□□□ -0.973e-7■■■■□ 23.5
PRKAB1-207ENST00000542698 PABPC4Q13310 644 aaKnown RBP eCLIP9□□□□□ -0.977e-11■■■□□ 16.4
PRKAB1-207ENST00000542698 DENND2CQ68D51 928 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 KRT26Q7Z3Y9 468 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 CACNA2D3Q8IZS8 1091 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 HNRNPLLQ8WVV9 542 aaKnown RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 CELF1Q92879 486 aaKnown RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 PPP1R3GB7ZBB8 358 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 RGS16O15492 202 aaPredicted RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 MAGEA9P43362 315 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 CACNB1Q02641 598 aaPredicted RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 GKAP1Q5VSY0 366 aaPredicted RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 ADAT2Q7Z6V5 191 aaKnown RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 NKIRAS1Q9NYS0 192 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 PKD2L1Q9P0L9 805 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 NFU1Q9UMS0 254 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 XDHP47989 1333 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 ATP5DP30049 168 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 HOXA7P31268 230 aaPredicted RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 SEPT2Q15019 361 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 NAA35Q5VZE5 725 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 PNMA8AQ86V59 439 aaPredicted RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 GSPT2Q8IYD1 628 aaKnown RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 NOA1Q8NC60 698 aaKnown RBP9□□□□□ -0.97
PRKAB1-207ENST00000542698 SLC44A5Q8NCS7 719 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 MMS19Q96T76 1030 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 AGPAT5Q9NUQ2 364 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 BARHL2Q9NY43 387 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 TRIM10Q9UDY6 481 aa9□□□□□ -0.97
PRKAB1-207ENST00000542698 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9□□□□□ -0.97
PRKAB1-207ENST00000542698 C3P01024 1663 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 LRRC53A6NM62 1247 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 hCG_1984214I3L0E3 225 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 ZNF18P17022 549 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 CYP2J2P51589 502 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 TROAPQ12815 778 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 IFT88Q13099 833 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 GLE1Q53GS7 698 aaKnown RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 ANKRD40Q6AI12 368 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 MCTP2Q6DN12 878 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 TAOK1Q7L7X3 1001 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 ZNF34Q8IZ26 560 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 STAG2Q8N3U4 1231 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 ZNF713Q8N859 430 aaPredicted RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 LRRN4CLQ8ND94 238 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 TRIM9Q9C026 710 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 SUGCTQ9HAC7 445 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 MLXIPQ9HAP2 919 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 KCND1Q9NSA2 647 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 ASIC3Q9UHC3 531 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 IKBKGQ9Y6K9 419 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 PXDNQ92626 1479 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 TNS3Q68CZ2 1445 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 TTLL1O95922 423 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 ALKBH5Q6P6C2 394 aaKnown RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 TMED8Q6PL24 325 aaPredicted RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 FAM178BQ8IXR5 827 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 RNF10Q8N5U6 811 aaKnown RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 SPATA4Q8NEY3 305 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 WHAMMQ8TF30 809 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 KIFAP3Q92845 792 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 OSBPL9Q96SU4 736 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 PLCB1Q9NQ66 1216 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 SERPINB13Q9UIV8 391 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 TARSL2A2RTX5 802 aaKnown RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 PGRMC1O00264 195 aaKnown RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 CD44P16070 742 aaKnown RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 SLC16A2P36021 539 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 RBM26Q5T8P6 1007 aaKnown RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 GUF1Q8N442 669 aaKnown RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 SH3RF3Q8TEJ3 882 aaPredicted RBP8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 TEKT1Q969V4 418 aa8.99□□□□□ -0.97
PRKAB1-207ENST00000542698 POTEMA6NI47 508 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 RHOBTB3O94955 611 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 SRGNP10124 158 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 FCER1AP12319 257 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 IRX5P78411 483 aaPredicted RBP8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 NKX1-1Q15270 411 aaPredicted RBP8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 NFRKBQ6P4R8 1299 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 ZNF365Q70YC5 407 aa8.98□□□□□ -0.97
PRKAB1-207ENST00000542698 FBF1Q8TES7 1133 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms