RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 PPP2R5BQ15173 497 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 SMAD2Q15796 467 aaKnown RBP6.21□□□□□ -1.42
CHD4-205ENST00000536301 CTC1Q2NKJ3 1217 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 LRRFIP1Q32MZ4 808 aaKnown RBP6.21□□□□□ -1.42
CHD4-205ENST00000536301 PUS10Q3MIT2 529 aaKnown RBP6.21□□□□□ -1.42
CHD4-205ENST00000536301 CCDC62Q6P9F0 684 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 ASCL5Q7RTU5 278 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 FAM160B2Q86V87 743 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 ERC1Q8IUD2 1116 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 RPAP2Q8IXW5 612 aaPredicted RBP6.21□□□□□ -1.42
CHD4-205ENST00000536301 ZNF444Q8N0Y2 327 aaPredicted RBP6.21□□□□□ -1.42
CHD4-205ENST00000536301 DBF4BQ8NFT6 615 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 NEDD1Q8NHV4 660 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 CAGE1Q8TC20 777 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 CHURC1Q8WUH1 139 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 EDAQ92838 391 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 DDRGK1Q96HY6 314 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 GMCL1Q96IK5 515 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 ALG1Q9BT22 464 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 NSUN3Q9H649 340 aaKnown RBP6.21□□□□□ -1.42
CHD4-205ENST00000536301 PRKAG3Q9UGI9 489 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 NCOR2Q9Y618 2525 aa6.21□□□□□ -1.42
CHD4-205ENST00000536301 DOCK5Q9H7D0 1870 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 PTPDC1A2A3K4 754 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 H3BNC9 293 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 STXBP3O00186 592 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 GRM6O15303 877 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 GPAA1O43292 621 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 SMARCA5O60264 1052 aaPredicted RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 UPP2O95045 317 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 PDGFBP01127 241 aaPredicted RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 ICAM1P05362 532 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 ZNF286BP0CG31 522 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 FDX1P10109 184 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 ARP10275 920 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 TXNP10599 105 aaKnown RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 PSEN2P49810 448 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 RPS6P62753 249 aaKnown RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 TFAP4Q01664 338 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 IKBKEQ14164 716 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 LY6KQ17RY6 165 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 TIGD5Q53EQ6 642 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 TSHZ3Q63HK5 1081 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 RCSD1Q6JBY9 416 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 TRIM67Q6ZTA4 783 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 CHST3Q7LGC8 479 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 BMP8AQ7Z5Y6 402 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 SESTD1Q86VW0 696 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 FBXO11Q86XK2 927 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 TMEM192Q8IY95 271 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 CLASRPQ8N2M8 674 aaKnown RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 PANK1Q8TE04 598 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 TBC1D5Q92609 795 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 PBXIP1Q96AQ6 731 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 KIF1BPQ96EK5 621 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 SEC62Q99442 399 aaKnown RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.2□□□□□ -1.428e-8■■■□□ 15.1
CHD4-205ENST00000536301 RANBP17Q9H2T7 1088 aaKnown RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 IL17RBQ9NRM6 502 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 GTF2IRD1Q9UHL9 959 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 INSL6Q9Y581 213 aa6.2□□□□□ -1.42
CHD4-205ENST00000536301 FRMPD2Q68DX3 1309 aaPredicted RBP6.2□□□□□ -1.42
CHD4-205ENST00000536301 MYH6P13533 1939 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 DNAH14Q0VDD8 3507 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 DMXL1Q9Y485 3027 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 H0Y858 1186 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 HAS3O00219 553 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 NKRFO15226 690 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHD4-205ENST00000536301 FOXP2O15409 715 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 SORBS3O60504 671 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 KPNA6O60684 536 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 PLA2G6O60733 806 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 TSPY3P0CV98 308 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 TSPY8P0CW00 308 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 TDO2P48775 406 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 ZXDAP98168 799 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 PDE4BQ07343 736 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 PDE4DQ08499 809 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 SMAD4Q13485 552 aaKnown RBP6.19□□□□□ -1.42
CHD4-205ENST00000536301 CAMK1Q14012 370 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 PTPROQ16827 1216 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 CCDC96Q2M329 555 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 SYDE2Q5VT97 1194 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 SEPT14Q6ZU15 432 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 ADGRD2Q7Z7M1 963 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 IFNL3Q8IZI9 196 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 CCDC155Q8N6L0 562 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 SCFD2Q8WU76 684 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 ASIC4Q96FT7 647 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 CPVLQ9H3G5 476 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 IGFLR1Q9H665 355 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 GPCPD1Q9NPB8 672 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 TLR9Q9NR96 1032 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 COL20A1Q9P218 1284 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 ADD3Q9UEY8 706 aaKnown RBP6.19□□□□□ -1.42
CHD4-205ENST00000536301 SYNPO2Q9UMS6 1093 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHD4-205ENST00000536301 TTC3P53804 2025 aa6.19□□□□□ -1.42
CHD4-205ENST00000536301 CEP250Q9BV73 2442 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms