RNA–Protein interactions for RNA: ENST00000535844.1

AC048338.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC048338.1, Length 2,748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048338.1-201ENST00000535844 ELF1P32519 619 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 TEX11Q8IYF3 940 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 CCDC155Q8N6L0 562 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 EHBP1Q8NDI1 1231 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 GLIS3Q8NEA6 775 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 MMTAG2Q9BU76 263 aaKnown RBP12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 SELENOOQ9BVL4 669 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 UBA5Q9GZZ9 404 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 ACBD3Q9H3P7 528 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 MMRN2Q9H8L6 949 aa12.39□□□□□ -0.43
AC048338.1-201ENST00000535844 BICDL2A1A5D9 508 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 GNAQP50148 359 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 DNA2P51530 1060 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 SLC7A5Q01650 507 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 NEDD9Q14511 834 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 NONOQ15233 471 aaKnown RBP eCLIP12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 SPA17Q15506 151 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 NFRKBQ6P4R8 1299 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 TBCKQ8TEA7 893 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 IFIH1Q9BYX4 1025 aaKnown RBP12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 FAM107BQ9H098 131 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 RABEP2Q9H5N1 569 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 ARHGAP20Q9P2F6 1191 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 PALM3A6NDB9 673 aaPredicted RBP12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 NCK2O43639 380 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 RASA1P20936 1047 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 VAV2P52735 878 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 CKAP4Q07065 602 aaKnown RBP12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 LRRC41Q15345 812 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 RRP36Q96EU6 259 aaKnown RBP12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 PIGSQ96S52 555 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 CRACR2AQ9BSW2 395 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 SLC24A3Q9HC58 644 aa12.38□□□□□ -0.43
AC048338.1-201ENST00000535844 GOLGB1Q14789 3259 aaKnown RBP12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 CCDC88AQ3V6T2 1871 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 POTEMA6NI47 508 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 CAND2O75155 1236 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 TUBBP07437 444 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 EIF4A3P38919 411 aaKnown RBP12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 MSL3Q8N5Y2 521 aaKnown RBP12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 DAGLBQ8NCG7 672 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 NOC3LQ8WTT2 800 aaKnown RBP12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 GJA10Q969M2 543 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 DMGDHQ9UI17 866 aaKnown RBP12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 MYL1P05976 194 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 IBSPP21815 317 aaPredicted RBP12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 HSPA1LP34931 641 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 PRPHP41219 470 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 KIF11P52732 1056 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 NEK8Q86SG6 692 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 FAM114A1Q8IWE2 563 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 AMOTL1Q8IY63 956 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 CCDC170Q8IYT3 715 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 ZMYND12Q9H0C1 365 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 VEZTQ9HBM0 779 aa12.37□□□□□ -0.43
AC048338.1-201ENST00000535844 FRMPD2Q68DX3 1309 aaPredicted RBP12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 RREB1Q92766 1687 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 MYMKA6NI61 221 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 LRRC53A6NM62 1247 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 AKR1B10O60218 316 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 PRPF6O94906 941 aaKnown RBP12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 GCFC2P16383 781 aaKnown RBP12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 NFIXQ14938 502 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 RRAGAQ7L523 313 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 TMC4Q7Z404 712 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 CREG2Q8IUH2 290 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 SMARCC1Q92922 1105 aaPredicted RBP12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 EYA3Q99504 573 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 C7orf25Q9BPX7 421 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 LRRC1Q9BTT6 524 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 NDST4Q9H3R1 872 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 IRAK4Q9NWZ3 460 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 PCDHA13Q9Y5I0 950 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 LAD1O00515 517 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 SLC37A4O43826 429 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 TDP2O95551 362 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 PAX7P23759 505 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 EIF6P56537 245 aaKnown RBP12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 SND1Q7KZF4 910 aaKnown RBP eCLIP12.36□□□□□ -0.438e-8■■■□□ 16.8
AC048338.1-201ENST00000535844 KRT25Q7Z3Z0 450 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 AMIGO3Q86WK7 504 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 CLEC10AQ8IUN9 316 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 RETREG2Q8NC44 543 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 CALML4Q96GE6 196 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 PURBQ96QR8 312 aaKnown RBP12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 ERGIC2Q96RQ1 377 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 NUDT12Q9BQG2 462 aa12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 TRIM6Q9C030 488 aaPredicted RBP12.36□□□□□ -0.43
AC048338.1-201ENST00000535844 KANSL2Q9H9L4 492 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms