RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 ZEB2O60315 1214 aa12.53□□□□□ -0.4
C11orf54-209ENST00000530620 CCL23P55773 120 aa12.53□□□□□ -0.4
C11orf54-209ENST00000530620 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
C11orf54-209ENST00000530620 CLEC4DQ8WXI8 215 aa12.53□□□□□ -0.4
C11orf54-209ENST00000530620 HERVK_113Q902F9 699 aa12.53□□□□□ -0.4
C11orf54-209ENST00000530620 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-209ENST00000530620 LNPKQ9C0E8 428 aa12.53□□□□□ -0.4
C11orf54-209ENST00000530620 ADD3Q9UEY8 706 aaKnown RBP12.53□□□□□ -0.4
C11orf54-209ENST00000530620 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-209ENST00000530620 Q9Y3F1 56 aa12.53□□□□□ -0.4
C11orf54-209ENST00000530620 COL4A4P53420 1690 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-209ENST00000530620 NEDD4P46934 1319 aa12.53□□□□□ -0.4
C11orf54-209ENST00000530620 SNHG28P0DPA3 235 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 CALML3P27482 149 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 PURAQ00577 322 aaKnown RBP12.52□□□□□ -0.41
C11orf54-209ENST00000530620 ZNF543Q08ER8 600 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 AKNAD1Q5T1N1 836 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 RNF207Q6ZRF8 634 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 RILPL2Q969X0 211 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 PRDM12Q9H4Q4 367 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 WDR19Q8NEZ3 1342 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 REV3LO60673 3130 aa12.52□□□□□ -0.41
C11orf54-209ENST00000530620 SPTBN5Q9NRC6 3674 aaKnown RBP12.51□□□□□ -0.41
C11orf54-209ENST00000530620 TRANK1O15050 2925 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 LOC102724159A0A0B4J2E5 919 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 FGBP02675 491 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 RPS6P62753 249 aaKnown RBP12.51□□□□□ -0.41
C11orf54-209ENST00000530620 PWP2Q15269 919 aaKnown RBP12.51□□□□□ -0.41
C11orf54-209ENST00000530620 MFSD6Q6ZSS7 791 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 OTOP2Q7RTS6 562 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 TATDN2Q93075 761 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 VWCEQ96DN2 955 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 SCLYQ96I15 445 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 ZKSCAN3Q9BRR0 538 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 ALDH8A1Q9H2A2 487 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-209ENST00000530620 CPVLQ9H3G5 476 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 PRDM6Q9NQX0 595 aa12.51□□□□□ -0.41
C11orf54-209ENST00000530620 TRMT13Q9NUP7 481 aaKnown RBP12.51□□□□□ -0.41
C11orf54-209ENST00000530620 YBX2Q9Y2T7 364 aaKnown RBP12.51□□□□□ -0.41
C11orf54-209ENST00000530620 RBM47A0AV96 593 aaKnown RBP12.5□□□□□ -0.41
C11orf54-209ENST00000530620 GOLGA8CPA6NN73 597 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 MYL3P08590 195 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 GOLGA8HP0CJ92 632 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 PCP11498 1178 aaKnown RBP12.5□□□□□ -0.41
C11orf54-209ENST00000530620 CYP2C9P11712 490 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 EDNRBP24530 442 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 CPT1AP50416 773 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 PDE4DQ08499 809 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 PPP2R5BQ15173 497 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 RAB30Q15771 203 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 USH1GQ495M9 461 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 NUDT18Q6ZVK8 323 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 OR6J1Q8NGC5 347 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 PPP1R13LQ8WUF5 828 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 COPS5Q92905 334 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 TTC14Q96N46 770 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 GAS2L1Q99501 681 aaPredicted RBP12.5□□□□□ -0.41
C11orf54-209ENST00000530620 SEZ6LQ9BYH1 1024 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 MTIF3Q9H2K0 278 aaKnown RBP12.5□□□□□ -0.41
C11orf54-209ENST00000530620 NKX2-4Q9H2Z4 354 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 POLR3EQ9NVU0 708 aa12.5□□□□□ -0.41
C11orf54-209ENST00000530620 DOCK5Q9H7D0 1870 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 TNKSO95271 1327 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 C3orf80F5H4A9 247 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 SMAPO00193 183 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 SDSP20132 328 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 ADGRE1Q14246 886 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 B4GALNT3Q6L9W6 998 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 ESR2Q92731 530 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
C11orf54-209ENST00000530620 MSRAQ9UJ68 235 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 PNMA2Q9UL42 364 aa12.49□□□□□ -0.41
C11orf54-209ENST00000530620 TCF20Q9UGU0 1960 aaKnown RBP12.49□□□□□ -0.41
C11orf54-209ENST00000530620 RAD50Q92878 1312 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 KDM4AO75164 1064 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 ARIH2O95376 493 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 RABGGTBP53611 331 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 CDC37Q16543 378 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-209ENST00000530620 FAM47CQ5HY64 1035 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 GPATCH4Q5T3I0 446 aaKnown RBP12.48□□□□□ -0.41
C11orf54-209ENST00000530620 PLEKHM2Q8IWE5 1019 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 PNMA1Q8ND90 353 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 DNERQ8NFT8 737 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 SCFD2Q8WU76 684 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 MTG1Q9BT17 334 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-209ENST00000530620 UBA5Q9GZZ9 404 aa12.48□□□□□ -0.41
C11orf54-209ENST00000530620 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
C11orf54-209ENST00000530620 ZBBXA8MT70 800 aa12.47□□□□□ -0.41
C11orf54-209ENST00000530620 B4E1Z4 1266 aa12.47□□□□□ -0.41
C11orf54-209ENST00000530620 ZNF213O14771 459 aa12.47□□□□□ -0.41
C11orf54-209ENST00000530620 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
C11orf54-209ENST00000530620 MYOGP15173 224 aa12.47□□□□□ -0.41
C11orf54-209ENST00000530620 FECHP22830 423 aa12.47□□□□□ -0.41
C11orf54-209ENST00000530620 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
C11orf54-209ENST00000530620 TTLL4Q14679 1199 aa12.47□□□□□ -0.41
C11orf54-209ENST00000530620 NBPF20Q3BBV1 942 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms