RNA–Protein interactions for RNA: ENST00000527118.5

RBBP4-218, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 3

Gene RBBP4, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-218ENST00000527118 DDAH1O94760 285 aa18.08■□□□□ 0.48
RBBP4-218ENST00000527118 MMP3P08254 477 aa18.08■□□□□ 0.48
RBBP4-218ENST00000527118 POLR2MP0CAP2 368 aa18.08■□□□□ 0.48
RBBP4-218ENST00000527118 PGM5Q15124 567 aa18.08■□□□□ 0.48
RBBP4-218ENST00000527118 PSRC1Q6PGN9 363 aaPredicted RBP18.08■□□□□ 0.48
RBBP4-218ENST00000527118 FCHSD1Q86WN1 690 aa18.08■□□□□ 0.48
RBBP4-218ENST00000527118 SLC17A8Q8NDX2 589 aa18.08■□□□□ 0.48
RBBP4-218ENST00000527118 IL31RAQ8NI17 732 aa18.08■□□□□ 0.48
RBBP4-218ENST00000527118 CTCFLQ8NI51 663 aaPredicted RBP18.08■□□□□ 0.48
RBBP4-218ENST00000527118 ZFP91Q96JP5 570 aaPredicted RBP18.08■□□□□ 0.48
RBBP4-218ENST00000527118 LRRC2Q9BYS8 371 aa18.08■□□□□ 0.48
RBBP4-218ENST00000527118 MAP3K20Q9NYL2 800 aaKnown RBP18.08■□□□□ 0.48
RBBP4-218ENST00000527118 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.48
RBBP4-218ENST00000527118 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.07■□□□□ 0.48
RBBP4-218ENST00000527118 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.07■□□□□ 0.48
RBBP4-218ENST00000527118 CCDC69A6NI79 296 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 SORBS3O60504 671 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 RXRAP19793 462 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 TRAF1Q13077 416 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 NFRKBQ6P4R8 1299 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 RAB11FIP4Q86YS3 637 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 SAMD3Q8N6K7 520 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 SCLYQ96I15 445 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 TMEM87BQ96K49 555 aa18.07■□□□□ 0.48
RBBP4-218ENST00000527118 GRXCR1A8MXD5 290 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 RGS20O76081 388 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 PLEKHA8P1O95397 391 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 SUPT20HL2P0C7V6 817 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 KIF5BP33176 963 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 RASIP1Q5U651 963 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 CMTR1Q8N1G2 835 aaKnown RBP18.06■□□□□ 0.48
RBBP4-218ENST00000527118 MAP3K14Q99558 947 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 CDX2Q99626 313 aaPredicted RBP18.06■□□□□ 0.48
RBBP4-218ENST00000527118 MTA3Q9BTC8 594 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
RBBP4-218ENST00000527118 CDH23Q9H251 3354 aa18.05■□□□□ 0.48
RBBP4-218ENST00000527118 FGBP02675 491 aa18.05■□□□□ 0.48
RBBP4-218ENST00000527118 DNAJB2P25686 324 aa18.05■□□□□ 0.48
RBBP4-218ENST00000527118 OTOP2Q7RTS6 562 aa18.05■□□□□ 0.48
RBBP4-218ENST00000527118 VSIG10LQ86VR7 867 aa18.05■□□□□ 0.48
RBBP4-218ENST00000527118 RRP36Q96EU6 259 aaKnown RBP18.05■□□□□ 0.48
RBBP4-218ENST00000527118 CXXC1Q9P0U4 656 aaPredicted RBP18.05■□□□□ 0.48
RBBP4-218ENST00000527118 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
RBBP4-218ENST00000527118 CCND2P30279 289 aa18.04■□□□□ 0.48
RBBP4-218ENST00000527118 PBX2P40425 430 aa18.04■□□□□ 0.48
RBBP4-218ENST00000527118 LIFRP42702 1097 aa18.04■□□□□ 0.48
RBBP4-218ENST00000527118 DGKDQ16760 1214 aa18.04■□□□□ 0.48
RBBP4-218ENST00000527118 DHX37Q8IY37 1157 aaKnown RBP18.04■□□□□ 0.48
RBBP4-218ENST00000527118 TMTC2Q8N394 836 aa18.04■□□□□ 0.48
RBBP4-218ENST00000527118 SRBD1Q8N5C6 995 aaKnown RBP18.04■□□□□ 0.48
RBBP4-218ENST00000527118 MYLIPQ8WY64 445 aa18.04■□□□□ 0.48
RBBP4-218ENST00000527118 HERVK_113Q902F9 699 aa18.04■□□□□ 0.48
RBBP4-218ENST00000527118 KAT2BQ92831 832 aa18.04■□□□□ 0.48
RBBP4-218ENST00000527118 GPKOWQ92917 476 aaPredicted RBP eCLIP18.04■□□□□ 0.48
RBBP4-218ENST00000527118 SEC63Q9UGP8 760 aaKnown RBP18.04■□□□□ 0.48
RBBP4-218ENST00000527118 EYSQ5T1H1 3165 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 CDC45O75419 566 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 ZNF286BP0CG31 522 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 GNAQP50148 359 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 PTPN11Q06124 597 aaPredicted RBP18.03■□□□□ 0.48
RBBP4-218ENST00000527118 LAMC2Q13753 1193 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 RNF20Q5VTR2 975 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 DEFB128Q7Z7B8 93 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 TET1Q8NFU7 2136 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 PPTC7Q8NI37 304 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
RBBP4-218ENST00000527118 VWCEQ96DN2 955 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 LZTS2Q9BRK4 669 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 PBX4Q9BYU1 374 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 NOD1Q9Y239 953 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 SLC12A7Q9Y666 1083 aa18.03■□□□□ 0.48
RBBP4-218ENST00000527118 hCG_1642624A0A1W2PR95 340 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 GGPS1O95749 300 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 CALM1P0DP23 149 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 CALM2P0DP24 149 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 CALM3P0DP25 149 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 UBA1P22314 1058 aaKnown RBP18.02■□□□□ 0.48
RBBP4-218ENST00000527118 SMARCA1P28370 1054 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 SP2Q02086 613 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 MYO9BQ13459 2157 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 PTGISQ16647 500 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 CELF3Q5SZQ8 465 aaKnown RBP18.02■□□□□ 0.48
RBBP4-218ENST00000527118 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 GDF6Q6KF10 455 aaPredicted RBP18.02■□□□□ 0.48
RBBP4-218ENST00000527118 USP17L6PQ6QN14 398 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 RPUSD2Q8IZ73 545 aaKnown RBP18.02■□□□□ 0.48
RBBP4-218ENST00000527118 CCDC82Q8N4S0 544 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 SMARCC2Q8TAQ2 1214 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 TIFAQ96CG3 184 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 CCDC136Q96JN2 1154 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 TCEANC2Q96MN5 208 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 ALG1Q9BT22 464 aa18.02■□□□□ 0.48
RBBP4-218ENST00000527118 MTIF3Q9H2K0 278 aaKnown RBP18.02■□□□□ 0.48
RBBP4-218ENST00000527118 TMEM265A0A087WTH1 108 aa18.01■□□□□ 0.47
RBBP4-218ENST00000527118 PSEN2P49810 448 aa18.01■□□□□ 0.47
RBBP4-218ENST00000527118 MRPS9P82933 396 aaKnown RBP18.01■□□□□ 0.47
RBBP4-218ENST00000527118 KCNV1Q6PIU1 500 aa18.01■□□□□ 0.47
RBBP4-218ENST00000527118 MICU3Q86XE3 530 aa18.01■□□□□ 0.47
RBBP4-218ENST00000527118 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
RBBP4-218ENST00000527118 CUL5Q93034 780 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms