RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 FAM124AQ86V42 546 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 CPNE8Q86YQ8 564 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 LINC00482Q8N8I6 264 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 SLC43A3Q8NBI5 491 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 NETO2Q8NC67 525 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 OR6P1Q8NGX9 317 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 DDX11Q96FC9 970 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 ACBD3Q9H3P7 528 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 NUDT5Q9UKK9 219 aa4.6□□□□□ -1.67
COPB1-205ENST00000526527 C2orf71A6NGG8 1288 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 SEPHS1P49903 392 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 PURAQ00577 322 aaKnown RBP4.59□□□□□ -1.67
COPB1-205ENST00000526527 GNPTABQ3T906 1256 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 FAM26FQ5R3K3 315 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 WWC2Q6AWC2 1192 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 CCDC81Q6ZN84 652 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 FGD4Q96M96 766 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 SYT3Q9BQG1 590 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.59□□□□□ -1.677e-8■□□□□ 9.7
COPB1-205ENST00000526527 PPP4R1LQ9P1A2 415 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 PCDHB10Q9UN67 800 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 SIT1Q9Y3P8 196 aa4.59□□□□□ -1.67
COPB1-205ENST00000526527 R3HCC1Q9Y3T6 440 aaKnown RBP4.59□□□□□ -1.67
COPB1-205ENST00000526527 ZBTB7AO95365 584 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 NTRK1P04629 796 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 EPHX1P07099 455 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 C8BP07358 591 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 RPL13P26373 211 aaKnown RBP4.58□□□□□ -1.68
COPB1-205ENST00000526527 DNAJA1P31689 397 aaKnown RBP4.58□□□□□ -1.68
COPB1-205ENST00000526527 HNRNPA0Q13151 305 aaKnown RBP4.58□□□□□ -1.68
COPB1-205ENST00000526527 SURF1Q15526 300 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 TNNI3KQ59H18 835 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 HEATR6Q6AI08 1181 aaKnown RBP4.58□□□□□ -1.68
COPB1-205ENST00000526527 ADAT2Q7Z6V5 191 aaKnown RBP4.58□□□□□ -1.68
COPB1-205ENST00000526527 USP33Q8TEY7 942 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 GORASP1Q9BQQ3 440 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 TINF2Q9BSI4 451 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 DEF6Q9H4E7 631 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 CGGBP1Q9UFW8 167 aaPredicted RBP4.58□□□□□ -1.68
COPB1-205ENST00000526527 BACE2Q9Y5Z0 518 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 SLC12A7Q9Y666 1083 aa4.58□□□□□ -1.68
COPB1-205ENST00000526527 NPHP3-ACAD11A0A0J9YXS1 232 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 C7orf72A4D263 438 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 PPM1BO75688 479 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 FUCA1P04066 466 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 CYP2C8P10632 490 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 PAMP19021 973 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 ATP2B1P20020 1258 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 NASPP49321 788 aaPredicted RBP4.57□□□□□ -1.68
COPB1-205ENST00000526527 EIF6P56537 245 aaKnown RBP4.57□□□□□ -1.68
COPB1-205ENST00000526527 INHBEP58166 350 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 AMPD2Q01433 879 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 FHL2Q14192 279 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 PALM2Q8IXS6 379 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 ARHGEF39Q8N4T4 335 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 DNERQ8NFT8 737 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 SREK1Q8WXA9 508 aaKnown RBP4.57□□□□□ -1.68
COPB1-205ENST00000526527 TANGO6Q9C0B7 1094 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 GBP3Q9H0R5 595 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 GINM1Q9NU53 330 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.57□□□□□ -1.68
COPB1-205ENST00000526527 EFR3BQ9Y2G0 817 aa4.57□□□□□ -1.68
COPB1-205ENST00000526527 NPEPPSL1A6NEC2 478 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 LAMTOR5O43504 91 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 HSP90B1P14625 803 aaKnown RBP4.56□□□□□ -1.68
COPB1-205ENST00000526527 ATF4P18848 351 aaPredicted RBP4.56□□□□□ -1.68
COPB1-205ENST00000526527 SOX9P48436 509 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 SLC7A5Q01650 507 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 MBLAC2Q68D91 279 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 MCTP2Q6DN12 878 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 ZNF585AQ6P3V2 769 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 FAM26EQ8N5C1 309 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 TXNDC5Q8NBS9 432 aaKnown RBP4.56□□□□□ -1.68
COPB1-205ENST00000526527 KLHL6Q8WZ60 621 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 ARMC5Q96C12 935 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 C11orf84Q9BUA3 381 aaPredicted RBP4.56□□□□□ -1.68
COPB1-205ENST00000526527 PHAXQ9H814 394 aaKnown RBP4.56□□□□□ -1.68
COPB1-205ENST00000526527 PPP1R1BQ9UD71 204 aaPredicted RBP4.56□□□□□ -1.68
COPB1-205ENST00000526527 TNFRSF18Q9Y5U5 241 aa4.56□□□□□ -1.68
COPB1-205ENST00000526527 TRBV23OR9-2A0A075B6M9 112 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 A0A1W2PQH9 124 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 GPR42O15529 346 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 NPHS1O60500 1241 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 STK10O94804 968 aaKnown RBP4.55□□□□□ -1.68
COPB1-205ENST00000526527 THBS2P35442 1172 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 GRB10Q13322 594 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 R3HDM1Q15032 1099 aaKnown RBP4.55□□□□□ -1.68
COPB1-205ENST00000526527 SOGA3Q5TF21 947 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 ETV3LQ6ZN32 361 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 STK32CQ86UX6 486 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 CKAP2LQ8IYA6 745 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 PLEKHO2Q8TD55 490 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 DPF3Q92784 378 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 CHFRQ96EP1 664 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 RCC1LQ96I51 464 aaKnown RBP4.55□□□□□ -1.68
COPB1-205ENST00000526527 HIRIP3Q9BW71 556 aaPredicted RBP4.55□□□□□ -1.68
COPB1-205ENST00000526527 CLEC1BQ9P126 229 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 TESMINQ9Y4I5 508 aa4.55□□□□□ -1.68
COPB1-205ENST00000526527 WDR33Q9C0J8 1336 aaKnown RBP4.54□□□□□ -1.68
COPB1-205ENST00000526527 U2SURPO15042 1029 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms