RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 ACTR10Q9NZ32 417 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 TIMM13Q9Y5L4 95 aaPredicted RBP5.82□□□□□ -1.48
CBX3-208ENST00000497498 DUSP10Q9Y6W6 482 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 X6R8D5 127 aa5.82□□□□□ -1.48
CBX3-208ENST00000497498 ITGAVP06756 1048 aa5.81□□□□□ -1.48
CBX3-208ENST00000497498 GJA9P57773 515 aa5.81□□□□□ -1.48
CBX3-208ENST00000497498 RPL11P62913 178 aaKnown RBP5.81□□□□□ -1.48
CBX3-208ENST00000497498 SMAD4Q13485 552 aaKnown RBP5.81□□□□□ -1.48
CBX3-208ENST00000497498 ACBD5Q5T8D3 534 aaPredicted RBP5.81□□□□□ -1.48
CBX3-208ENST00000497498 FERMT3Q86UX7 667 aa5.81□□□□□ -1.48
CBX3-208ENST00000497498 KREMEN2Q8NCW0 462 aa5.81□□□□□ -1.48
CBX3-208ENST00000497498 CCDC140Q96MF4 163 aa5.81□□□□□ -1.48
CBX3-208ENST00000497498 BTG4Q9NY30 223 aa5.81□□□□□ -1.48
CBX3-208ENST00000497498 PRKAG3Q9UGI9 489 aa5.81□□□□□ -1.48
CBX3-208ENST00000497498 TMEFF2Q9UIK5 374 aaPredicted RBP5.81□□□□□ -1.48
CBX3-208ENST00000497498 MRVI1Q9Y6F6 885 aa5.81□□□□□ -1.48
CBX3-208ENST00000497498 SMARCA5O60264 1052 aaPredicted RBP5.8□□□□□ -1.48
CBX3-208ENST00000497498 SUSD5O60279 629 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 CAPNS1P04632 268 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 FPR2P25090 351 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 RPL13P26373 211 aaKnown RBP5.8□□□□□ -1.48
CBX3-208ENST00000497498 THBS2P35442 1172 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 GTF2A2P52657 109 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 KCNAB2Q13303 367 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 SV2CQ496J9 727 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 NLRP10Q86W26 655 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 VPS37DQ86XT2 251 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 FAM26EQ8N5C1 309 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 KYQ8NBH2 561 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 ADAMTS17Q8TE56 1095 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 DIO2Q92813 273 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 SYT3Q9BQG1 590 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 PALD1Q9ULE6 856 aa5.8□□□□□ -1.48
CBX3-208ENST00000497498 B2RBV5 119 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 CPP00450 1065 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 SSBP05455 408 aaKnown RBP eCLIP5.79□□□□□ -1.48
CBX3-208ENST00000497498 SNRPB2P08579 225 aaKnown RBP5.79□□□□□ -1.48
CBX3-208ENST00000497498 CNR2P34972 360 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 BCL6P41182 706 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 LARP1BQ659C4 914 aaKnown RBP5.79□□□□□ -1.48
CBX3-208ENST00000497498 MRM1Q6IN84 353 aaKnown RBP5.79□□□□□ -1.48
CBX3-208ENST00000497498 CD300LDQ6UXZ3 194 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 CEP68Q76N32 757 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 MILR1Q7Z6M3 343 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 GGNQ86UU5 652 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 ZC3H18Q86VM9 953 aaKnown RBP5.79□□□□□ -1.48
CBX3-208ENST00000497498 FAM126BQ8IXS8 530 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 TTLL6Q8N841 843 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 MICAL1Q8TDZ2 1067 aa5.79□□□□□ -1.48
CBX3-208ENST00000497498 DDX1Q92499 740 aaKnown RBP5.79□□□□□ -1.48
CBX3-208ENST00000497498 MEFVO15553 781 aaPredicted RBP5.78□□□□□ -1.48
CBX3-208ENST00000497498 ERCC5P28715 1186 aaPredicted RBP5.78□□□□□ -1.48
CBX3-208ENST00000497498 ETFBP38117 255 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 ECI1P42126 302 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 ITGA1P56199 1179 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 SF1Q15637 639 aaKnown RBP5.78□□□□□ -1.48
CBX3-208ENST00000497498 FXNQ16595 210 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 PRR31Q5SQ13 230 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 DENND5AQ6IQ26 1287 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 HHIPL2Q6UWX4 724 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 RCBTB1Q8NDN9 531 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 TRMT2BQ96GJ1 504 aaKnown RBP5.78□□□□□ -1.48
CBX3-208ENST00000497498 BORCS6Q96GS4 357 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 C1orf159Q96HA4 380 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 TMEM169Q96HH4 297 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 RBM15Q96T37 977 aaKnown RBP eCLIP5.78□□□□□ -1.48
CBX3-208ENST00000497498 NGRNQ9NPE2 291 aaKnown RBP5.78□□□□□ -1.48
CBX3-208ENST00000497498 LRP2BPQ9P2M1 347 aa5.78□□□□□ -1.48
CBX3-208ENST00000497498 H7BY64 318 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 K7ESM1 405 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 MYO1BO43795 1136 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 DDAH1O94760 285 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 ITGB3P05106 788 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 LTBRP36941 435 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 GFRA1P56159 465 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 CR1LQ2VPA4 569 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 FAM26FQ5R3K3 315 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 PPIL6Q8IXY8 311 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 FBXL7Q9UJT9 491 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 ZNF652Q9Y2D9 606 aa5.77□□□□□ -1.49
CBX3-208ENST00000497498 FGRP09769 529 aa5.76□□□□□ -1.49
CBX3-208ENST00000497498 STAT5AP42229 794 aa5.76□□□□□ -1.49
CBX3-208ENST00000497498 PRSS53Q2L4Q9 553 aa5.76□□□□□ -1.49
CBX3-208ENST00000497498 RGL3Q3MIN7 710 aa5.76□□□□□ -1.49
CBX3-208ENST00000497498 SLC35F1Q5T1Q4 408 aa5.76□□□□□ -1.49
CBX3-208ENST00000497498 TMEM145Q8NBT3 493 aa5.76□□□□□ -1.49
CBX3-208ENST00000497498 EPN3Q9H201 632 aa5.76□□□□□ -1.49
CBX3-208ENST00000497498 COA3Q9Y2R0 106 aaPredicted RBP5.76□□□□□ -1.49
CBX3-208ENST00000497498 NPFFR2Q9Y5X5 522 aa5.76□□□□□ -1.49
CBX3-208ENST00000497498 HGSO14964 777 aaPredicted RBP5.75□□□□□ -1.49
CBX3-208ENST00000497498 TADA3O75528 432 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 LCP1P13796 627 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 KCNJ6P48051 423 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 NKX3-2P78367 333 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 KIAA2012Q0VF49 1180 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 LSAMPQ13449 338 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 GNL2Q13823 731 aaKnown RBP5.75□□□□□ -1.49
CBX3-208ENST00000497498 CHRNA2Q15822 529 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 EMC4Q5J8M3 183 aa5.75□□□□□ -1.49
CBX3-208ENST00000497498 EEPD1Q7L9B9 569 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms