RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 LILRB2Q8N423 598 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 THAP3Q8WTV1 239 aaPredicted RBP4.77□□□□□ -1.65
RBM28-207ENST00000488249 MRFAP1L1Q96HT8 127 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 ZFYVE21Q9BQ24 234 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 DHRS4Q9BTZ2 278 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 CLDND1Q9NY35 253 aa4.77□□□□□ -1.65
RBM28-207ENST00000488249 IRS2Q9Y4H2 1338 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 TCAF2A6NFQ2 919 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 N4BP3O15049 544 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 ZBTB7AO95365 584 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 CDR1P51861 262 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 EPHB3P54753 998 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 GPR85P60893 370 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 ZNF200P98182 395 aaPredicted RBP4.76□□□□□ -1.65
RBM28-207ENST00000488249 SLC9A5Q14940 896 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 C2orf27AQ580R0 203 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 LBX2Q6XYB7 198 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 DCP2Q8IU60 420 aaKnown RBP4.76□□□□□ -1.65
RBM28-207ENST00000488249 IFNL3Q8IZI9 196 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 MZB1Q8WU39 189 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 PTPRN2Q92932 1015 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 KISS1RQ969F8 398 aaPredicted RBP4.76□□□□□ -1.65
RBM28-207ENST00000488249 TSPAN17Q96FV3 270 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 CD320Q9NPF0 282 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 SMG5Q9UPR3 1016 aaKnown RBP4.76□□□□□ -1.65
RBM28-207ENST00000488249 COA3Q9Y2R0 106 aaPredicted RBP4.76□□□□□ -1.65
RBM28-207ENST00000488249 MRPS23Q9Y3D9 190 aaKnown RBP4.76□□□□□ -1.65
RBM28-207ENST00000488249 SIT1Q9Y3P8 196 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 PCDHA5Q9Y5H7 936 aa4.76□□□□□ -1.65
RBM28-207ENST00000488249 ASXL2Q76L83 1435 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 C6orf222P0C671 652 aaPredicted RBP4.75□□□□□ -1.65
RBM28-207ENST00000488249 YBX3P16989 372 aaKnown RBP eCLIP4.75□□□□□ -1.65
RBM28-207ENST00000488249 SLC6A11P48066 632 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 MAMDC2Q7Z304 686 aaPredicted RBP4.75□□□□□ -1.65
RBM28-207ENST00000488249 ANKLE2Q86XL3 938 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 IGDCC3Q8IVU1 814 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 ZSWIM2Q8NEG5 633 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.75□□□□□ -1.65
RBM28-207ENST00000488249 SEC14L1Q92503 715 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 ALG3Q92685 438 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 AP5M1Q9H0R1 490 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 CDIP1Q9H305 208 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 PIF1Q9H611 641 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 PLA2G2DQ9UNK4 145 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 TRAF6Q9Y4K3 522 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 PTCH2Q9Y6C5 1203 aa4.75□□□□□ -1.65
RBM28-207ENST00000488249 CCDC163A0A0D9SF12 145 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 DBX1A6NMT0 343 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 NPIPB6E9PJ23 425 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 SGSM2O43147 1006 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 DGKIO75912 1065 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 FBLN1P23142 703 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 NCKAP1LP55160 1127 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 GABREP78334 506 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 TARBP2Q15633 366 aaKnown RBP4.74□□□□□ -1.65
RBM28-207ENST00000488249 KCNA10Q16322 511 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 KIZQ2M2Z5 673 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 CILP2Q8IUL8 1156 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 SIGLEC10Q96LC7 697 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 JAM3Q9BX67 310 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 EPB41L1Q9H4G0 881 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 BCAS3Q9H6U6 928 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 USP35Q9P2H5 1018 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 PPARGC1AQ9UBK2 798 aaKnown RBP4.74□□□□□ -1.65
RBM28-207ENST00000488249 IRAK3Q9Y616 596 aa4.74□□□□□ -1.65
RBM28-207ENST00000488249 AQP7O14520 342 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 IRS4O14654 1257 aaPredicted RBP4.73□□□□□ -1.65
RBM28-207ENST00000488249 HGSO14964 777 aaPredicted RBP4.73□□□□□ -1.65
RBM28-207ENST00000488249 BUB1BO60566 1050 aaPredicted RBP4.73□□□□□ -1.65
RBM28-207ENST00000488249 ASGR2P07307 311 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 NCAM1P13591 858 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 PFKLP17858 780 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 IGFBP6P24592 240 aaPredicted RBP4.73□□□□□ -1.65
RBM28-207ENST00000488249 GRK2P25098 689 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 PMLP29590 882 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 GRK3P35626 688 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 LINC00310P59036 64 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 CHRNA2Q15822 529 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.73□□□□□ -1.65
RBM28-207ENST00000488249 RNF38Q9H0F5 515 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 PALD1Q9ULE6 856 aa4.73□□□□□ -1.65
RBM28-207ENST00000488249 CNOT6Q9ULM6 557 aaKnown RBP4.73□□□□□ -1.65
RBM28-207ENST00000488249 TADA3O75528 432 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 SOD2P04179 222 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 ATF2P15336 505 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 SSPNQ14714 243 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 EMC4Q5J8M3 183 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 STEAP3Q658P3 488 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 MILR1Q7Z6M3 343 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 MTDHQ86UE4 582 aaKnown RBP4.72□□□□□ -1.65
RBM28-207ENST00000488249 AMIGO3Q86WK7 504 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 TMEFF1Q8IYR6 380 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 SH3TC2Q8TF17 1288 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 CPA5Q8WXQ8 436 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 TOX2Q96NM4 488 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 ALG1Q9BT22 464 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 KANSL2Q9H9L4 492 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 ZNF652Q9Y2D9 606 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 KCTD3Q9Y597 815 aa4.72□□□□□ -1.65
RBM28-207ENST00000488249 FAM47E-STBD1D6RA91 191 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms