RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 TMEM57Q8N5G2 664 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 MTMR4Q9NYA4 1195 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 HDAC6Q9UBN7 1215 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 EXOC6BQ9Y2D4 811 aa18.16■□□□□ 0.5
U2AF1-211ENST00000486519 KDM4AO75164 1064 aa18.15■□□□□ 0.5
U2AF1-211ENST00000486519 STAT2P52630 851 aa18.15■□□□□ 0.5
U2AF1-211ENST00000486519 CBX2Q14781 532 aaPredicted RBP18.15■□□□□ 0.5
U2AF1-211ENST00000486519 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
U2AF1-211ENST00000486519 AFG1LQ8WV93 481 aa18.15■□□□□ 0.5
U2AF1-211ENST00000486519 SAMD11Q96NU1 681 aa18.15■□□□□ 0.5
U2AF1-211ENST00000486519 YME1L1Q96TA2 773 aa18.15■□□□□ 0.5
U2AF1-211ENST00000486519 CLEC1BQ9P126 229 aa18.15■□□□□ 0.5
U2AF1-211ENST00000486519 KPNA6O60684 536 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 EFCAB14O75071 495 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 AMHP03971 560 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 NBL1P41271 181 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 KCTD1Q719H9 257 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 FRMD5Q7Z6J6 570 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 RPAP2Q8IXW5 612 aaPredicted RBP18.14■□□□□ 0.49
U2AF1-211ENST00000486519 ADSSL1Q8N142 457 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 PUS7LQ9H0K6 701 aaKnown RBP18.14■□□□□ 0.49
U2AF1-211ENST00000486519 INCENPQ9NQS7 918 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 GTF2IRD1Q9UHL9 959 aa18.14■□□□□ 0.49
U2AF1-211ENST00000486519 MYH7BA7E2Y1 1941 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.13■□□□□ 0.49
U2AF1-211ENST00000486519 GALR2O43603 387 aaPredicted RBP18.13■□□□□ 0.49
U2AF1-211ENST00000486519 EYA4O95677 639 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 MMP3P08254 477 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 CTNNB1P35222 781 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 RRP1P56182 461 aaKnown RBP18.13■□□□□ 0.49
U2AF1-211ENST00000486519 IKQ13123 557 aaPredicted RBP18.13■□□□□ 0.49
U2AF1-211ENST00000486519 ADAM15Q13444 863 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 CAMK1Q14012 370 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 ADGRD2Q7Z7M1 963 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 STAG1Q8WVM7 1258 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 MKNK2Q9HBH9 465 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 CCPG1Q9ULG6 757 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 PRR12Q9ULL5 1215 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 KIAA1217Q5T5P2 1943 aa18.13■□□□□ 0.49
U2AF1-211ENST00000486519 MINDY4BA8MYZ0 360 aa18.12■□□□□ 0.49
U2AF1-211ENST00000486519 PARNO95453 639 aaKnown RBP18.12■□□□□ 0.49
U2AF1-211ENST00000486519 ARP10275 920 aa18.12■□□□□ 0.49
U2AF1-211ENST00000486519 TXNP10599 105 aaKnown RBP18.12■□□□□ 0.49
U2AF1-211ENST00000486519 MCCP23508 829 aa18.12■□□□□ 0.49
U2AF1-211ENST00000486519 TOP1MTQ969P6 601 aa18.12■□□□□ 0.49
U2AF1-211ENST00000486519 RMDN1Q96DB5 314 aa18.12■□□□□ 0.49
U2AF1-211ENST00000486519 ARPP21Q9UBL0 812 aaPredicted RBP18.12■□□□□ 0.49
U2AF1-211ENST00000486519 RAD50Q92878 1312 aa18.12■□□□□ 0.49
U2AF1-211ENST00000486519 TTLL1O95922 423 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 FDX1P10109 184 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 BRDTQ58F21 947 aaPredicted RBP18.11■□□□□ 0.49
U2AF1-211ENST00000486519 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 TMEM105Q8N8V8 129 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 SMRP1Q8NCR6 262 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 CNTNAP3BQ96NU0 1288 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 ALG1Q9BT22 464 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 CNTNAP3Q9BZ76 1288 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 IRF2BPLQ9H1B7 796 aa18.11■□□□□ 0.49
U2AF1-211ENST00000486519 EPG5Q9HCE0 2579 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 GSG1L2A8MUP6 293 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 NKRFO15226 690 aaKnown RBP eCLIP18.1■□□□□ 0.49
U2AF1-211ENST00000486519 NCK2O43639 380 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 GLP2RO95838 553 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 CT47B1P0C2W7 299 aaPredicted RBP18.1■□□□□ 0.49
U2AF1-211ENST00000486519 EDNRBP24530 442 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 DNAJB1P25685 340 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 CALML3P27482 149 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 NDUFV1P49821 464 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 ARHGAP1Q07960 439 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 PTK7Q13308 1070 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 SBK1Q52WX2 424 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 PLEKHG4Q58EX7 1191 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 SCFD2Q8WU76 684 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
U2AF1-211ENST00000486519 RPGRIP1Q96KN7 1286 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 BCL11AQ9H165 835 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 EPB41L4AQ9HCS5 686 aaPredicted RBP18.1■□□□□ 0.49
U2AF1-211ENST00000486519 PAG1Q9NWQ8 432 aa18.1■□□□□ 0.49
U2AF1-211ENST00000486519 USP15Q9Y4E8 981 aaPredicted RBP18.1■□□□□ 0.49
U2AF1-211ENST00000486519 PTPDC1A2A3K4 754 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 C5orf67F2Z3F1 127 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 RBM10P98175 930 aaKnown RBP18.09■□□□□ 0.49
U2AF1-211ENST00000486519 PDE4BQ07343 736 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 LY6KQ17RY6 165 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 CCDC62Q6P9F0 684 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 CHURC1Q8WUH1 139 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 CLEC4DQ8WXI8 215 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 DDRGK1Q96HY6 314 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 GMCL1Q96IK5 515 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 BOLA2Q9H3K6 86 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 ADD3Q9UEY8 706 aaKnown RBP18.09■□□□□ 0.49
U2AF1-211ENST00000486519 BARX2Q9UMQ3 279 aaPredicted RBP18.09■□□□□ 0.49
U2AF1-211ENST00000486519 PLXNA4Q9HCM2 1894 aa18.09■□□□□ 0.49
U2AF1-211ENST00000486519 MYO10Q9HD67 2058 aa18.08■□□□□ 0.49
U2AF1-211ENST00000486519 NCOR2Q9Y618 2525 aa18.08■□□□□ 0.49
U2AF1-211ENST00000486519 CACNA1GO43497 2377 aa18.08■□□□□ 0.48
U2AF1-211ENST00000486519 ICAM1P05362 532 aa18.08■□□□□ 0.48
U2AF1-211ENST00000486519 ZNF286BP0CG31 522 aa18.08■□□□□ 0.48
U2AF1-211ENST00000486519 SLC1A4P43007 532 aa18.08■□□□□ 0.48
U2AF1-211ENST00000486519 PSEN2P49810 448 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms