RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 HCLS1P14317 486 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 PDE6AP16499 860 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 PDIA3P30101 505 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 ME1P48163 572 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 EIF5P55010 431 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 TPM4P67936 248 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 STK38Q15208 465 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 SAFBQ15424 915 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 CAVIN4Q5BKX8 364 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 TMED8Q6PL24 325 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 CLEC4GQ6UXB4 293 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 STOX1Q6ZVD7 989 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 TTC6Q86TZ1 520 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 VPS37DQ86XT2 251 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 TMTC2Q8N394 836 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 NSUN7Q8NE18 718 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 KCNG4Q8TDN1 519 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 LRRC2Q9BYS8 371 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 NYXQ9GZU5 481 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 USP25Q9UHP3 1055 aa6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 ANGEL1Q9UNK9 670 aaKnown RBP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 NIP7Q9Y221 180 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATPAF1-204ENST00000474020 SPATA31A5Q5VU36 1347 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 SPATA31A7Q8IWB4 1347 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 ZNF532Q9HCE3 1301 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 WNK3Q9BYP7 1800 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 A0A096LPE4 126 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 CCDC196A0A1B0GTZ2 297 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 A0A1W2PPZ6 126 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 NPHP1O15259 732 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 SART1O43290 800 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 HYAL3O43820 417 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 ZNF500O60304 480 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 CPNE3O75131 537 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 ADCY5O95622 1261 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 IGLV1-40P01703 118 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 IGHA2P01877 340 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 FGAP02671 866 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 HMGB2P26583 209 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 MCAMP43121 646 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 TDO2P48775 406 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 METAP2P50579 478 aaKnown RBP eCLIP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 EVCP57679 992 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 HAND2P61296 217 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 CCT2P78371 535 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 CHAF1AQ13111 956 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 DHX8Q14562 1220 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 ALX1Q15699 326 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 STX1AQ16623 288 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 DNTTIP2Q5QJE6 756 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 KIAA0319Q5VV43 1072 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 FDX2Q6P4F2 183 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 GIMAP6Q6P9H5 292 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 ANKRD18AQ8IVF6 992 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 MB21D2Q8IYB1 491 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 CCDC34Q96HJ3 373 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 TCF12Q99081 682 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 MTA3Q9BTC8 594 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 LIN7BQ9HAP6 207 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 DACT1Q9NYF0 836 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 LRP2BPQ9P2M1 347 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 ORC3Q9UBD5 711 aaPredicted RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 HOOK1Q9UJC3 728 aaKnown RBP6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 DOT1LQ8TEK3 1739 aa6.79□□□□□ -1.32
ATPAF1-204ENST00000474020 ITGB4P16144 1822 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 LOC100289279A0A1B0GTE1 492 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 GOLGA8AA7E2F4 631 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 BECN2A8MW95 431 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 PATL2C9JE40 543 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 ZBTB43O43298 467 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 NRDCO43847 1150 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 OFD1O75665 1012 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 YEATS4O95619 227 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 SLC3A2P08195 630 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 XBP1P17861 261 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 PHKA1P46020 1223 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 PREPP48147 710 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 TERF1P54274 439 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 AKAP17AQ02040 695 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 FAM160A1Q05DH4 1040 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 ORC1Q13415 861 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 TMEM67Q5HYA8 995 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 SUSD4Q5VX71 490 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 TTLL5Q6EMB2 1281 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 MFSD6Q6ZSS7 791 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 CCAR1Q8IX12 1150 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 DRC7Q8IY82 874 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 CEP57L1Q8IYX8 460 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 MAGEB6Q8N7X4 407 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 VGLL2Q8N8G2 317 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 MRPS27Q92552 414 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 ACSBG1Q96GR2 724 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 TMPRSS13Q9BYE2 586 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 PUS7LQ9H0K6 701 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 PIH1D3Q9NQM4 214 aaKnown RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 TOMM22Q9NS69 142 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 ANO10Q9NW15 660 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 RCOR1Q9UKL0 485 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms