RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 NPTXRO95502 500 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 MSL3P1P0C860 447 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 NAT1P18440 290 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 GTF2A2P52657 109 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 RTP1P59025 263 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 ERVFC1P60507 584 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 LSAMPQ13449 338 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 SNX17Q15036 470 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 GALNT18Q6P9A2 607 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 ABHD17CQ6PCB6 329 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 RNF180Q86T96 592 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 LRRTM3Q86VH5 581 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 NLRP10Q86W26 655 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 AMIGO3Q86WK7 504 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 ANKLE2Q86XL3 938 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 KIF18BQ86Y91 864 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 RIOX2Q8IUF8 465 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 DHX37Q8IY37 1157 aaKnown RBP2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 LRRC56Q8IYG6 542 aaPredicted RBP2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 LILRA2Q8N149 483 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 GPATCH3Q96I76 525 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 MAGEB10Q96LZ2 347 aaPredicted RBP2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 SLC38A3Q99624 504 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 PLCD4Q9BRC7 762 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 SLKQ9H2G2 1235 aaPredicted RBP2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 SPC25Q9HBM1 224 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 CRTAC1Q9NQ79 661 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 IFT57Q9NWB7 429 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 FBLN5Q9UBX5 448 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 NDOR1Q9UHB4 597 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 SFMBT1Q9UHJ3 866 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 MAPRE3Q9UPY8 281 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 PCDHA9Q9Y5H5 950 aa2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 TNPO3Q9Y5L0 923 aaKnown RBP2.79□□□□□ -1.96
NUCKS1-202ENST00000464938 LRRC10BA6NIK2 292 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 B4E1Z4 1266 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 DNAJC6O75061 913 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 USP2O75604 605 aaPredicted RBP2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 RASGRP1O95267 797 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 ZSCAN22P10073 491 aaPredicted RBP2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 PNLIPP16233 465 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 STAT3P40763 770 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 BCL6P41182 706 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 RAP1GAPP47736 663 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 MECP2P51608 486 aaKnown RBP2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 HK2P52789 917 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 KRTAP10-2P60368 255 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 RPL11P62913 178 aaKnown RBP2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 LACTBP83111 547 aaPredicted RBP2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 AMPD3Q01432 767 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 GUCY1A3Q02108 690 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 PAK1Q13153 545 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 LAPTM5Q13571 262 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 KIR3DS1Q14943 382 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 KIZQ2M2Z5 673 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 TIGD5Q53EQ6 642 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 ZCCHC8Q6NZY4 707 aaKnown RBP2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 C16orf59Q7L2K0 433 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 OXR1Q8N573 874 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 NAT16Q8N8M0 369 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 PDLIM7Q9NR12 457 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 PPARGC1AQ9UBK2 798 aaKnown RBP2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 PCDHA8Q9Y5H6 950 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 PCDHA2Q9Y5H9 948 aa2.78□□□□□ -1.96
NUCKS1-202ENST00000464938 TRAF5O00463 557 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 IRS4O14654 1257 aaPredicted RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 SRGAP3O43295 1099 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 MYO1BO43795 1136 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 PSPNO60542 156 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 PDE8AO60658 829 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 TADA3O75528 432 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 EYA4O95677 639 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 SOD2P04179 222 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 GLI4P10075 376 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 MYCLP1P12525 358 aaPredicted RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 TRHRP34981 398 aaPredicted RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 IGFALSP35858 605 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 AFMP43652 599 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 ERVFRD-1P60508 538 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 ZNF460Q14592 562 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 PCBP1Q15365 356 aaKnown RBP eCLIP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 PTPROQ16827 1216 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 TAF7LQ5H9L4 462 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 EMC4Q5J8M3 183 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 RNF187Q5TA31 235 aaPredicted RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 FYB2Q5VWT5 728 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 CDCA2Q69YH5 1023 aaPredicted RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 CEP128Q6ZU80 1094 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 CEP68Q76N32 757 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 OTOP1Q7RTM1 612 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 OVCH1Q7RTY7 1134 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 FILIP1Q7Z7B0 1213 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 ZSWIM9Q86XI8 627 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 JAMLQ86YT9 394 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 AFAP1L2Q8N4X5 818 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 LZTR1Q8N653 840 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 MYLIPQ8WY64 445 aa2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 SYTL4Q96C24 671 aaPredicted RBP2.77□□□□□ -1.97
NUCKS1-202ENST00000464938 C20orf173Q96LM9 149 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms