RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 PTH1RQ03431 593 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 ZNF543Q08ER8 600 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 NBPF20Q3BBV1 942 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 SPRED2Q7Z698 418 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 DEFB128Q7Z7B8 93 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 RPUSD2Q8IZ73 545 aaKnown RBP9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 CCDC136Q96JN2 1154 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 NECAB3Q96P71 396 aaPredicted RBP9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 UHRF1Q96T88 793 aaPredicted RBP9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 MTG1Q9BT17 334 aaPredicted RBP9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 GPCPD1Q9NPB8 672 aa9.29□□□□□ -0.92
CDC42BPA-210ENST00000462553 MYO7AQ13402 2215 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 RFXAPO00287 272 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 SUPT20HL2P0C7V6 817 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 POU3F3P20264 500 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 TFF2Q03403 129 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 PPP2R5BQ15173 497 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 BMP2KLQ5H9B9 411 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 RRP12Q5JTH9 1297 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 NFRKBQ6P4R8 1299 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 RNF207Q6ZRF8 634 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 SCFD2Q8WU76 684 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 CPVLQ9H3G5 476 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 MTCH2Q9Y6C9 303 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 TAF6LQ9Y6J9 622 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 RALGAPA2Q2PPJ7 1873 aa9.28□□□□□ -0.92
CDC42BPA-210ENST00000462553 NKRFO15226 690 aaKnown RBP eCLIP9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 NEFLP07196 543 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 IQCF3P0C7M6 154 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 PCP11498 1178 aaKnown RBP9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 BMP1P13497 986 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 RFC2P35250 354 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 KCNQ1P51787 676 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 TAP1Q03518 808 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 PDE4DQ08499 809 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 GPNMBQ14956 572 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 FAM47CQ5HY64 1035 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 KRT40Q6A162 431 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 CCDC62Q6P9F0 684 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 MICALL1Q8N3F8 863 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 DNERQ8NFT8 737 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 DHX38Q92620 1227 aaKnown RBP9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 KAT2BQ92831 832 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 SLC9A7Q96T83 725 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 ESYT1Q9BSJ8 1104 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 LSG1Q9H089 658 aaKnown RBP9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 TOMM22Q9NS69 142 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 COL20A1Q9P218 1284 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 KAT6AQ92794 2004 aa9.27□□□□□ -0.93
CDC42BPA-210ENST00000462553 B4E1Z4 1266 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 ZNF213O14771 459 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 LPXNO60711 386 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 CENPBP07199 599 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 MMP3P08254 477 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 CYP21A2P08686 494 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 GOLGA8HP0CJ92 632 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 PTPN11Q06124 597 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 ARHGAP1Q07960 439 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 TCTN1Q2MV58 587 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 USH1GQ495M9 461 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 TMEM67Q5HYA8 995 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 MFSD6Q6ZSS7 791 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 STOX1Q6ZVD7 989 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 HERC6Q8IVU3 1022 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 RUFY2Q8WXA3 655 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 TBC1D5Q92609 795 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 RNF41Q9H4P4 317 aaPredicted RBP9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 CERS4Q9HA82 394 aa9.26□□□□□ -0.93
CDC42BPA-210ENST00000462553 LCHNA4D1U4 455 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 KPNA6O60684 536 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 TXNP10599 105 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 WDR5P61964 334 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 RBL2Q08999 1139 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 COL9A3Q14050 684 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 CDC37Q16543 378 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 IMMTQ16891 758 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 GPATCH4Q5T3I0 446 aaKnown RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 GDF6Q6KF10 455 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 TMCO2Q7Z6W1 182 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 SESTD1Q86VW0 696 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 RGS22Q8NE09 1264 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 PHOSPHO2Q8TCD6 241 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 SYTL5Q8TDW5 730 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 AFG1LQ8WV93 481 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 MAP4K1Q92918 833 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 TTC14Q96N46 770 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 ZKSCAN3Q9BRR0 538 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 GPHNQ9NQX3 736 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 CTNNA3Q9UI47 895 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 PNMA2Q9UL42 364 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 LOXHD1Q8IVV2 1947 aa9.25□□□□□ -0.93
CDC42BPA-210ENST00000462553 KIAA1671Q9BY89 1806 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 COL4A6Q14031 1691 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 OPLAHO14841 1288 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 KDM4AO75164 1064 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 BAIAP3O94812 1187 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 CXCL10P02778 98 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 ACTN1P12814 892 aa9.24□□□□□ -0.93
CDC42BPA-210ENST00000462553 NT5C2P49902 561 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms