RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 MTDHQ86UE4 582 aaKnown RBP6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 NIM1KQ8IY84 436 aa6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 TRMT2BQ96GJ1 504 aaKnown RBP6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 INTS4Q96HW7 963 aaKnown RBP6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 TNPO3Q9Y5L0 923 aaKnown RBP6.59□□□□□ -1.35
HMGB3P6-201ENST00000444896 IRS4O14654 1257 aaPredicted RBP6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 WNT9AO14904 365 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 GRK2P25098 689 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 GRK3P35626 688 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 TXKP42681 527 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 PAK1Q13153 545 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 ZNF460Q14592 562 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 BICRALQ6AI39 1079 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 RIOX2Q8IUF8 465 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 USP33Q8TEY7 942 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 PLAAQ9Y263 795 aa6.58□□□□□ -1.36
HMGB3P6-201ENST00000444896 A0A087X0B3 334 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 SRGAP3O43295 1099 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 CLSTN1O94985 981 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 ASLP04424 464 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 SRGAP2CP0DJJ0 459 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 NAT1P18440 290 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 ARL4AP40617 200 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 MFSD3Q96ES6 412 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 ALG1Q9BT22 464 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 RXFP1Q9HBX9 757 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 INTS7Q9NVH2 962 aaKnown RBP6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 FAM53CQ9NYF3 392 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 KLHL14Q9P2G3 628 aa6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 MAGEC2Q9UBF1 373 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
HMGB3P6-201ENST00000444896 A0A1W2PQJ5 194 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 ZC3H12DA2A288 527 aaKnown RBP6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 FAM47E-STBD1D6RA91 191 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 MASP1P48740 699 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 HABP4Q5JVS0 413 aaKnown RBP6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 ADGRF1Q5T601 910 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 MROH9Q5TGP6 573 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 WWC2Q6AWC2 1192 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 PAQR3Q6TCH7 311 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 NETO2Q8NC67 525 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 DDX1Q92499 740 aaKnown RBP6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 LIN37Q96GY3 246 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 KCNJ15Q99712 375 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 SLC6A17Q9H1V8 727 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 SIT1Q9Y3P8 196 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 HCFC2Q9Y5Z7 792 aa6.56□□□□□ -1.36
HMGB3P6-201ENST00000444896 TCRBV5S4A2TA0A5A2 114 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 LRRC10BA6NIK2 292 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 SGSM2O43147 1006 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 OPA1O60313 960 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 CYBBP04839 570 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 PYGMP11217 842 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 COL6A2P12110 1019 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 IGFALSP35858 605 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 RPTNQ6XPR3 784 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 C16orf59Q7L2K0 433 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 OTOP3Q7RTS5 596 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 LRRTM3Q86VH5 581 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 IRF2BP1Q8IU81 584 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 ZC3H7AQ8IWR0 971 aaKnown RBP6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 FBXW5Q969U6 566 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 TARS2Q9BW92 718 aaKnown RBP6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 MTFR1LQ9H019 292 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 EPB41L1Q9H4G0 881 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 CBLCQ9ULV8 474 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 COQ6Q9Y2Z9 468 aa6.55□□□□□ -1.36
HMGB3P6-201ENST00000444896 NUDT19A8MXV4 375 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 F8W031 263 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 NKRFO15226 690 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 TADA3O75528 432 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 MPOP05164 745 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 PDE6BP35913 854 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 YBX1P67809 324 aaKnown RBP6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 MLANAQ16655 118 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 ZCCHC8Q6NZY4 707 aaKnown RBP6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 CNNM4Q6P4Q7 775 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 OVCH1Q7RTY7 1134 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 SLC38A3Q99624 504 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 SLKQ9H2G2 1235 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 ZNF552Q9H707 407 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 KCNK12Q9HB15 430 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 SLC6A20Q9NP91 592 aa6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 COA3Q9Y2R0 106 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P6-201ENST00000444896 CCDC66A2RUB6 948 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 OR14I1A6ND48 311 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 GSG1L2A8MUP6 293 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 AMY2AP04746 511 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 MYCLP1P12525 358 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 AMY2BP19961 511 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 POU3F2P20265 443 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 SLC6A11P48066 632 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 NR1I3Q14994 352 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 RAB3GAP1Q15042 981 aa6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 PCBP1Q15365 356 aaKnown RBP eCLIP6.53□□□□□ -1.36
HMGB3P6-201ENST00000444896 PKN1Q16512 942 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms