RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 SERINC3Q13530 473 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 RASGRF1Q13972 1273 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 CBX2Q14781 532 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 CPZQ66K79 652 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 IQCEQ6IPM2 695 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 TMEM52Q8NDY8 209 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 NUP43Q8NFH3 380 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 BTN2A2Q8WVV5 523 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 OSBPL2Q9H1P3 480 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 ACSL6Q9UKU0 697 aa4.34□□□□□ -1.71
HMGB1P9-201ENST00000429856 NPHP3-ACAD11A0A0J9YXS1 232 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 A0A1W2PQU0 124 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 NUDT19A8MXV4 375 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 MATN3O15232 486 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 SCG5P05408 212 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 SNRPB2P08579 225 aaKnown RBP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 PRKCAP17252 672 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 CANXP27824 592 aaKnown RBP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 GDF5P43026 501 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 CEBPAP49715 358 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 PPP2R2AP63151 447 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 MAP4K2Q12851 820 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 IFRD2Q12894 506 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 HSP90AA2PQ14568 343 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 NR1I3Q14994 352 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 E4F1Q66K89 784 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 SDE2Q6IQ49 451 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 NLGN2Q8NFZ4 835 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 GPATCH3Q96I76 525 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 JMJD8Q96S16 334 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 MMP19Q99542 508 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 PLCD4Q9BRC7 762 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 AARSD1Q9BTE6 412 aaKnown RBP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 IMPACTQ9P2X3 320 aa4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 TMA7Q9Y2S6 64 aaKnown RBP4.33□□□□□ -1.72
HMGB1P9-201ENST00000429856 SBNO2Q9Y2G9 1366 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 IRS2Q9Y4H2 1338 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 A0A1W2PQJ5 194 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 C1QTNF3-AMACRE9PGA6 284 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 NPHS1O60500 1241 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 ITGB3P05106 788 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 THBDP07204 575 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 PLS3P13797 630 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 KCNJ6P48051 423 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 GFRA1P56159 465 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 KCNAB2Q13303 367 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 MTERF2Q49AM1 385 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 ACBD5Q5T8D3 534 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 EGFLAMQ63HQ2 1017 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 LIPIQ6XZB0 460 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 NPLOC4Q8TAT6 608 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 DEPDC7Q96QD5 511 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 LGR4Q9BXB1 951 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 PDLIM7Q9NR12 457 aa4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 MRPL42Q9Y6G3 142 aaKnown RBP4.32□□□□□ -1.72
HMGB1P9-201ENST00000429856 TRAV20A0A0B4J274 112 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 CCDC85CA6NKD9 419 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 MEFVO15553 781 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 TBX1O43435 398 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 CAPNS1P04632 268 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 IGFBP6P24592 240 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 LIMS1P48059 325 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 MAPKAPK2P49137 400 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 GTF2A2P52657 109 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 MVKQ03426 396 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 RASA3Q14644 834 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 TESK1Q15569 626 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 NFE2L2Q16236 605 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 ZC3H14Q6PJT7 736 aaKnown RBP4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 CABP7Q86V35 215 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 FRS2Q8WU20 508 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 KCTD13Q8WZ19 329 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 DDX1Q92499 740 aaKnown RBP4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 SRPK1Q96SB4 655 aaKnown RBP4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 SPATA25Q9BR10 227 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 MENTQ9BUN1 341 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 MRIQ9BWK5 157 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 SPATA9Q9BWV2 254 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 TNFRSF12AQ9NP84 129 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 GPRC5CQ9NQ84 441 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 SNTG2Q9NY99 539 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 CLEC1BQ9P126 229 aa4.31□□□□□ -1.72
HMGB1P9-201ENST00000429856 SRGAP3O43295 1099 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 MYO1BO43795 1136 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 FGFR1P11362 822 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 CNR2P34972 360 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 ECI1P42126 302 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 FOXO4P98177 505 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 SSRP1Q08945 709 aaKnown RBP4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 LONRF2Q1L5Z9 754 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 ZC3H12BQ5HYM0 836 aaKnown RBP4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 RPTNQ6XPR3 784 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 CPNE8Q86YQ8 564 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 ADGRG2Q8IZP9 1017 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 LZTR1Q8N653 840 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 TMEM145Q8NBT3 493 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 FNIP1Q8TF40 1166 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 DIO2Q92813 273 aa4.3□□□□□ -1.72
HMGB1P9-201ENST00000429856 IER2Q9BTL4 223 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms