RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 RABGGTBP53611 331 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 GRM4Q14833 912 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 RAB30Q15771 203 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 NFRKBQ6P4R8 1299 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 NFXL1Q6ZNB6 911 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 DHX37Q8IY37 1157 aaKnown RBP13.95□□□□□ -0.18
TTC3-208ENST00000428693 ZFP91Q96JP5 570 aaPredicted RBP13.95□□□□□ -0.18
TTC3-208ENST00000428693 GAS2L1Q99501 681 aaPredicted RBP13.95□□□□□ -0.18
TTC3-208ENST00000428693 ALG1Q9BT22 464 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 NKX2-4Q9H2Z4 354 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 PRDM12Q9H4Q4 367 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 TAF6LQ9Y6J9 622 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 EYSQ5T1H1 3165 aa13.95□□□□□ -0.18
TTC3-208ENST00000428693 PALM3A6NDB9 673 aaPredicted RBP13.94□□□□□ -0.18
TTC3-208ENST00000428693 GCOM1H8Y6P7 765 aaPredicted RBP13.94□□□□□ -0.18
TTC3-208ENST00000428693 SGSM2O43147 1006 aa13.94□□□□□ -0.18
TTC3-208ENST00000428693 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
TTC3-208ENST00000428693 MMP3P08254 477 aa13.94□□□□□ -0.18
TTC3-208ENST00000428693 POLR2MP0CAP2 368 aa13.94□□□□□ -0.18
TTC3-208ENST00000428693 IGFBP4P22692 258 aa13.94□□□□□ -0.18
TTC3-208ENST00000428693 PTGISQ16647 500 aa13.94□□□□□ -0.18
TTC3-208ENST00000428693 DGKDQ16760 1214 aa13.94□□□□□ -0.18
TTC3-208ENST00000428693 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
TTC3-208ENST00000428693 RBM8AQ9Y5S9 174 aaKnown RBP13.94□□□□□ -0.18
TTC3-208ENST00000428693 ACTN1P12814 892 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 HSD17B4P51659 736 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 ARHGAP1Q07960 439 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 TRAF1Q13077 416 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 BFSP2Q13515 415 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 RASIP1Q5U651 963 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 CCDC62Q6P9F0 684 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 STOX1Q6ZVD7 989 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 C7orf31Q8N865 590 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
TTC3-208ENST00000428693 MYL10Q9BUA6 226 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 MAF1Q9H063 256 aa13.93□□□□□ -0.18
TTC3-208ENST00000428693 DDX41Q9UJV9 622 aaKnown RBP13.93□□□□□ -0.18
TTC3-208ENST00000428693 MYH7BA7E2Y1 1941 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 KIAA1217Q5T5P2 1943 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 PNMA6FA0A0J9YX94 578 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 OPLAHO14841 1288 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 ZNF286BP0CG31 522 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 ATP2A2P16615 1042 aaKnown RBP13.92□□□□□ -0.18
TTC3-208ENST00000428693 CCND2P30279 289 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 PTPN11Q06124 597 aaPredicted RBP13.92□□□□□ -0.18
TTC3-208ENST00000428693 LAMC2Q13753 1193 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 CCDC85BQ15834 202 aaPredicted RBP13.92□□□□□ -0.18
TTC3-208ENST00000428693 CCDC155Q8N6L0 562 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 MAP4K1Q92918 833 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 PDCD2LQ9BRP1 358 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 PRUNE2Q8WUY3 3088 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 SCN10AQ9Y5Y9 1956 aa13.92□□□□□ -0.18
TTC3-208ENST00000428693 SCN5AQ14524 2016 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 CCDC69A6NI79 296 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 PRC1O43663 620 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 GGPS1O95749 300 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 PFKMP08237 780 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 IQCF3P0C7M6 154 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 MYOGP15173 224 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 PSEN2P49810 448 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 PGM5Q15124 567 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 PPP2R2DQ66LE6 453 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 GDF6Q6KF10 455 aaPredicted RBP13.91□□□□□ -0.18
TTC3-208ENST00000428693 RAB11FIP4Q86YS3 637 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 MICALL1Q8N3F8 863 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 IL31RAQ8NI17 732 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 MTMR8Q96EF0 704 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 RRP36Q96EU6 259 aaKnown RBP13.91□□□□□ -0.18
TTC3-208ENST00000428693 SPATA33Q96N06 139 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 COL25A1Q9BXS0 654 aaPredicted RBP13.91□□□□□ -0.18
TTC3-208ENST00000428693 RIOX1Q9H6W3 641 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 MLXIPQ9HAP2 919 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 ANO2Q9NQ90 1003 aa13.91□□□□□ -0.18
TTC3-208ENST00000428693 SEC63Q9UGP8 760 aaKnown RBP13.91□□□□□ -0.18
TTC3-208ENST00000428693 YBX2Q9Y2T7 364 aaKnown RBP13.91□□□□□ -0.18
TTC3-208ENST00000428693 TRIP12Q14669 1992 aaPredicted RBP13.91□□□□□ -0.18
TTC3-208ENST00000428693 CYTH3O43739 400 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 RXRAP19793 462 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 KIF5BP33176 963 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 RFC2P35250 354 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 ANTXR2P58335 489 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 TROAPQ12815 778 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 MFSD10Q14728 455 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 KIAA0753Q2KHM9 967 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
TTC3-208ENST00000428693 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 PPTC7Q8NI37 304 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 SMARCC2Q8TAQ2 1214 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 KAT2BQ92831 832 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 CUL5Q93034 780 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 KATNAL1Q9BW62 490 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 CERS4Q9HA82 394 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 MAP3K20Q9NYL2 800 aaKnown RBP13.9□□□□□ -0.18
TTC3-208ENST00000428693 RTEL1Q9NZ71 1219 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 HDAC6Q9UBN7 1215 aa13.9□□□□□ -0.18
TTC3-208ENST00000428693 GBF1Q92538 1859 aa13.89□□□□□ -0.19
TTC3-208ENST00000428693 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms