RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 HSD17B4P51659 736 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 NECTIN1Q15223 517 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 BMP2KLQ5H9B9 411 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 OTOP2Q7RTS6 562 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 VSIG10LQ86VR7 867 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 RPUSD2Q8IZ73 545 aaKnown RBP10.75□□□□□ -0.69
NUP50-206ENST00000422489 CCDC82Q8N4S0 544 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 SAMD3Q8N6K7 520 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 RETREG2Q8NC44 543 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 RRP36Q96EU6 259 aaKnown RBP10.75□□□□□ -0.69
NUP50-206ENST00000422489 SCLYQ96I15 445 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 CCDC136Q96JN2 1154 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 TMEM87BQ96K49 555 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 PDCD2LQ9BRP1 358 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 NOC4LQ9BVI4 516 aaKnown RBP10.75□□□□□ -0.69
NUP50-206ENST00000422489 LRRC2Q9BYS8 371 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 LY9Q9HBG7 655 aa10.75□□□□□ -0.69
NUP50-206ENST00000422489 MAP3K20Q9NYL2 800 aaKnown RBP10.75□□□□□ -0.69
NUP50-206ENST00000422489 DDX41Q9UJV9 622 aaKnown RBP10.75□□□□□ -0.69
NUP50-206ENST00000422489 SH2B2O14492 632 aaPredicted RBP10.74□□□□□ -0.69
NUP50-206ENST00000422489 CCND2P30279 289 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 GNAQP50148 359 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 ARHGAP1Q07960 439 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 LAMC2Q13753 1193 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 PGM5Q15124 567 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 RNF20Q5VTR2 975 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 PSRC1Q6PGN9 363 aaPredicted RBP10.74□□□□□ -0.69
NUP50-206ENST00000422489 SYNE3Q6ZMZ3 975 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 DEFB128Q7Z7B8 93 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 CMTR1Q8N1G2 835 aaKnown RBP10.74□□□□□ -0.69
NUP50-206ENST00000422489 GUCD1Q96NT3 240 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 MAP3K14Q99558 947 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 CDX2Q99626 313 aaPredicted RBP10.74□□□□□ -0.69
NUP50-206ENST00000422489 LZTS2Q9BRK4 669 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 ALG1Q9BT22 464 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 SEC63Q9UGP8 760 aaKnown RBP10.74□□□□□ -0.69
NUP50-206ENST00000422489 SLC12A7Q9Y666 1083 aa10.74□□□□□ -0.69
NUP50-206ENST00000422489 hCG_1642624A0A1W2PR95 340 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 ZBBXA8MT70 800 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 DDAH1O94760 285 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 PLEKHA8P1O95397 391 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 MMP3P08254 477 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 COL9A3Q14050 684 aaPredicted RBP10.73□□□□□ -0.69
NUP50-206ENST00000422489 PTGISQ16647 500 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 DGKDQ16760 1214 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 NFRKBQ6P4R8 1299 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 KCNV1Q6PIU1 500 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 SRBD1Q8N5C6 995 aaKnown RBP10.73□□□□□ -0.69
NUP50-206ENST00000422489 IL31RAQ8NI17 732 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 SMARCC2Q8TAQ2 1214 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 MYLIPQ8WY64 445 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 CUL5Q93034 780 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 SPATA33Q96N06 139 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 NEK1Q96PY6 1258 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 MTA3Q9BTC8 594 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 FTOQ9C0B1 505 aaKnown RBP eCLIP10.73□□□□□ -0.69
NUP50-206ENST00000422489 WNT8AQ9H1J5 351 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
NUP50-206ENST00000422489 TTYH1Q9H313 450 aaPredicted RBP10.73□□□□□ -0.69
NUP50-206ENST00000422489 MLXIPQ9HAP2 919 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 RTEL1Q9NZ71 1219 aa10.73□□□□□ -0.69
NUP50-206ENST00000422489 CDC45O75419 566 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 GGPS1O95749 300 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 CALM1P0DP23 149 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 CALM2P0DP24 149 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 CALM3P0DP25 149 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 DNAJB2P25686 324 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 PBX2P40425 430 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 LIFRP42702 1097 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 PSEN2P49810 448 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 SP2Q02086 613 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 GHRHRQ02643 423 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 PTPN11Q06124 597 aaPredicted RBP10.72□□□□□ -0.69
NUP50-206ENST00000422489 USP17L6PQ6QN14 398 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 C7orf31Q8N865 590 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 FANCBQ8NB91 859 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 HERVK_113Q902F9 699 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 GPKOWQ92917 476 aaPredicted RBP eCLIP10.72□□□□□ -0.69
NUP50-206ENST00000422489 TIFAQ96CG3 184 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 TCEANC2Q96MN5 208 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 SPZ1Q9BXG8 430 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 CXXC1Q9P0U4 656 aaPredicted RBP10.72□□□□□ -0.69
NUP50-206ENST00000422489 MSRAQ9UJ68 235 aa10.72□□□□□ -0.69
NUP50-206ENST00000422489 NAP1L2Q9ULW6 460 aaPredicted RBP10.72□□□□□ -0.69
NUP50-206ENST00000422489 PPFIA4O75335 1185 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 RGS20O76081 388 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 ZNF286BP0CG31 522 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 SMARCA1P28370 1054 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 FGD1P98174 961 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 BFSP2Q13515 415 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 HSDL1Q3SXM5 330 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 CELF3Q5SZQ8 465 aaKnown RBP10.71□□□□□ -0.69
NUP50-206ENST00000422489 MYSM1Q5VVJ2 828 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 GDF6Q6KF10 455 aaPredicted RBP10.71□□□□□ -0.69
NUP50-206ENST00000422489 MICU3Q86XE3 530 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 KAT2BQ92831 832 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 PBX4Q9BYU1 374 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 BCAS3Q9H6U6 928 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 PSTPIP2Q9H939 334 aa10.71□□□□□ -0.69
NUP50-206ENST00000422489 HDAC6Q9UBN7 1215 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms