RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 COG5Q9UP83 839 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 MTCH2Q9Y6C9 303 aa18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 SPTBN5Q9NRC6 3674 aaKnown RBP18.16■□□□□ 0.5
SBDSP1-201ENST00000415772 SCN5AQ14524 2016 aa18.15■□□□□ 0.5
SBDSP1-201ENST00000415772 B4E1Z4 1266 aa18.15■□□□□ 0.5
SBDSP1-201ENST00000415772 EIF2AK2P19525 551 aaKnown RBP18.15■□□□□ 0.5
SBDSP1-201ENST00000415772 GDF6Q6KF10 455 aaPredicted RBP18.15■□□□□ 0.5
SBDSP1-201ENST00000415772 DHX37Q8IY37 1157 aaKnown RBP18.15■□□□□ 0.5
SBDSP1-201ENST00000415772 VWCEQ96DN2 955 aa18.15■□□□□ 0.5
SBDSP1-201ENST00000415772 KRT23Q9C075 422 aa18.15■□□□□ 0.5
SBDSP1-201ENST00000415772 CTNNA3Q9UI47 895 aa18.15■□□□□ 0.5
SBDSP1-201ENST00000415772 EIF3JO75822 258 aaKnown RBP18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 TAP1Q03518 808 aa18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 ARHGAP1Q07960 439 aa18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 QRICH1Q2TAL8 776 aa18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 CCDC62Q6P9F0 684 aa18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 CNKSR3Q6P9H4 555 aa18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 TBC1D5Q92609 795 aa18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 C1QTNF1Q9BXJ1 281 aa18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 CNNM2Q9H8M5 875 aa18.14■□□□□ 0.49
SBDSP1-201ENST00000415772 SCN10AQ9Y5Y9 1956 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 EFCAB14O75071 495 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 MYCLP12524 364 aaPredicted RBP18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 POU3F3P20264 500 aaPredicted RBP18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 PSEN2P49810 448 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 KCNQ1P51787 676 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 WDR5P61964 334 aaKnown RBP18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 LAMC2Q13753 1193 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 IFIT1BQ5T764 474 aaKnown RBP18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 SESTD1Q86VW0 696 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 HLA-CQ95604 372 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 NECAB3Q96P71 396 aaPredicted RBP18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 AMNQ9BXJ7 453 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 GTF2IRD1Q9UHL9 959 aa18.13■□□□□ 0.49
SBDSP1-201ENST00000415772 NR3C2P08235 984 aa18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 BMP1P13497 986 aa18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 TRAF1Q13077 416 aa18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 IKBKEQ14164 716 aa18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 MFSD10Q14728 455 aa18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 KIAA0753Q2KHM9 967 aa18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 ENAHQ8N8S7 591 aaPredicted RBP18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 PXMP2Q9NR77 195 aa18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 HDAC6Q9UBN7 1215 aa18.12■□□□□ 0.49
SBDSP1-201ENST00000415772 ZNF286BP0CG31 522 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 CKBP12277 381 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 PTK7Q13308 1070 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 GRB10Q13322 594 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 KCNV1Q6PIU1 500 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 CHD1LQ86WJ1 897 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 JMJD4Q9H9V9 463 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 ZSWIM5Q9P217 1185 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 COL20A1Q9P218 1284 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 DDX41Q9UJV9 622 aaKnown RBP18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 MTUS1Q9ULD2 1270 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 CHD9Q3L8U1 2897 aa18.11■□□□□ 0.49
SBDSP1-201ENST00000415772 LAMA4Q16363 1823 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 ABHD14A-ACY1A0A1B0GW23 586 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 EPOPA6NHQ4 379 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 TRDNQ13061 729 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 KRT40Q6A162 431 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 PPTC7Q8NI37 304 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 KAT2BQ92831 832 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 RAD9AQ99638 391 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 DSCC1Q9BVC3 393 aa18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 SUPT16HQ9Y5B9 1047 aaKnown RBP18.1■□□□□ 0.49
SBDSP1-201ENST00000415772 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 SORBS3O60504 671 aa18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 FAM117BQ6P1L5 589 aa18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 HOMER1Q86YM7 354 aa18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 EMID1Q96A84 441 aaPredicted RBP18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 SPATA33Q96N06 139 aa18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 MLXIPQ9HAP2 919 aa18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 MAP3K20Q9NYL2 800 aaKnown RBP18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 PCDHA1Q9Y5I3 950 aa18.09■□□□□ 0.49
SBDSP1-201ENST00000415772 ERICH2A1L162 156 aa18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 F2P00734 622 aa18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 CCND2P30279 289 aa18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 DEFB103AP81534 67 aa18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 TMCO2Q7Z6W1 182 aaPredicted RBP18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 GDPD5Q8WTR4 605 aa18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 FAM122AQ96E09 287 aa18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 TGS1Q96RS0 853 aaKnown RBP18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 LMCD1Q9NZU5 365 aa18.08■□□□□ 0.48
SBDSP1-201ENST00000415772 EMSYQ7Z589 1322 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 LCHNA4D1U4 455 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 ZBTB5O15062 677 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 PPFIA4O75335 1185 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 ARHGEF15O94989 841 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 GJB5O95377 273 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 GGPS1O95749 300 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 AMHP03971 560 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 HSD17B4P51659 736 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 RBL2Q08999 1139 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 ZNF618Q5T7W0 954 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 PLEKHM2Q8IWE5 1019 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 SMC5Q8IY18 1101 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 DHX38Q92620 1227 aaKnown RBP18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 PDCD2LQ9BRP1 358 aa18.07■□□□□ 0.48
SBDSP1-201ENST00000415772 OSBPL3Q9H4L5 887 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms