RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 MMP3P08254 477 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 POLR2MP0CAP2 368 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 MCM5P33992 734 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
PKP4-203ENST00000411900 ARHGAP1Q07960 439 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 PGM5Q15124 567 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 NECTIN1Q15223 517 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 CTCFLQ8NI51 663 aaPredicted RBP11.64□□□□□ -0.55
PKP4-203ENST00000411900 PDCD2LQ9BRP1 358 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
PKP4-203ENST00000411900 WNT8AQ9H1J5 351 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 TTYH1Q9H313 450 aaPredicted RBP11.64□□□□□ -0.55
PKP4-203ENST00000411900 STXBP5LQ9Y2K9 1186 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 MRVI1Q9Y6F6 885 aa11.64□□□□□ -0.55
PKP4-203ENST00000411900 TRIP12Q14669 1992 aaPredicted RBP11.64□□□□□ -0.55
PKP4-203ENST00000411900 CDH23Q9H251 3354 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 RBAK-RBAKDNI3L0D1 243 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 EIF3JO75822 258 aaKnown RBP11.63□□□□□ -0.55
PKP4-203ENST00000411900 DDAH1O94760 285 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 OTOP2Q7RTS6 562 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 CCDC82Q8N4S0 544 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 SLC17A8Q8NDX2 589 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.55
PKP4-203ENST00000411900 TCEANC2Q96MN5 208 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 MAF1Q9H063 256 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 SEMA6BQ9H3T3 888 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 IL23AQ9NPF7 189 aa11.63□□□□□ -0.55
PKP4-203ENST00000411900 DDX41Q9UJV9 622 aaKnown RBP11.63□□□□□ -0.55
PKP4-203ENST00000411900 EYSQ5T1H1 3165 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 TANC1Q9C0D5 1861 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.62□□□□□ -0.55
PKP4-203ENST00000411900 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.62□□□□□ -0.55
PKP4-203ENST00000411900 KPNA6O60684 536 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 RGS20O76081 388 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 ZNF286BP0CG31 522 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 DNAJB2P25686 324 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 KIF5BP33176 963 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 PBX2P40425 430 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 GHRHRQ02643 423 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 PSRC1Q6PGN9 363 aaPredicted RBP11.62□□□□□ -0.55
PKP4-203ENST00000411900 DEFB128Q7Z7B8 93 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 DHX37Q8IY37 1157 aaKnown RBP11.62□□□□□ -0.55
PKP4-203ENST00000411900 SRBD1Q8N5C6 995 aaKnown RBP11.62□□□□□ -0.55
PKP4-203ENST00000411900 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 RRP36Q96EU6 259 aaKnown RBP11.62□□□□□ -0.55
PKP4-203ENST00000411900 TMEM87BQ96K49 555 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 CDX2Q99626 313 aaPredicted RBP11.62□□□□□ -0.55
PKP4-203ENST00000411900 ALG1Q9BT22 464 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 SEZ6LQ9BYH1 1024 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 CXXC1Q9P0U4 656 aaPredicted RBP11.62□□□□□ -0.55
PKP4-203ENST00000411900 NOD1Q9Y239 953 aa11.62□□□□□ -0.55
PKP4-203ENST00000411900 CDC45O75419 566 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 FGBP02675 491 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 SUPT20HL2P0C7V6 817 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 CASTP20810 708 aaKnown RBP11.61□□□□□ -0.55
PKP4-203ENST00000411900 CCND2P30279 289 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 SP2Q02086 613 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 TRAF1Q13077 416 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 GDF6Q6KF10 455 aaPredicted RBP11.61□□□□□ -0.55
PKP4-203ENST00000411900 NFRKBQ6P4R8 1299 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 USP17L6PQ6QN14 398 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 VSIG10LQ86VR7 867 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 MICU3Q86XE3 530 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 SMARCC2Q8TAQ2 1214 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 KAT2BQ92831 832 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 SPZ1Q9BXG8 430 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 BCAS3Q9H6U6 928 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 MAP3K20Q9NYL2 800 aaKnown RBP11.61□□□□□ -0.55
PKP4-203ENST00000411900 RTEL1Q9NZ71 1219 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 SEC63Q9UGP8 760 aaKnown RBP11.61□□□□□ -0.55
PKP4-203ENST00000411900 SLC12A7Q9Y666 1083 aa11.61□□□□□ -0.55
PKP4-203ENST00000411900 ZBBXA8MT70 800 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 GGPS1O95749 300 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 UBA1P22314 1058 aaKnown RBP11.6□□□□□ -0.55
PKP4-203ENST00000411900 LIFRP42702 1097 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 LAMC2Q13753 1193 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 PTGISQ16647 500 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 DGKDQ16760 1214 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 ADCK5Q3MIX3 580 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 RASIP1Q5U651 963 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 RNF20Q5VTR2 975 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 TMTC2Q8N394 836 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 SAMD3Q8N6K7 520 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 HERVK_113Q902F9 699 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 TIFAQ96CG3 184 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 SPATA33Q96N06 139 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 NEK1Q96PY6 1258 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 MAP3K14Q99558 947 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 MTA3Q9BTC8 594 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 PBX4Q9BYU1 374 aa11.6□□□□□ -0.55
PKP4-203ENST00000411900 CALM1P0DP23 149 aa11.59□□□□□ -0.55
PKP4-203ENST00000411900 CALM2P0DP24 149 aa11.59□□□□□ -0.55
PKP4-203ENST00000411900 CALM3P0DP25 149 aa11.59□□□□□ -0.55
PKP4-203ENST00000411900 PSEN2P49810 448 aa11.59□□□□□ -0.55
PKP4-203ENST00000411900 GNAQP50148 359 aa11.59□□□□□ -0.55
PKP4-203ENST00000411900 RABGGTBP53611 331 aa11.59□□□□□ -0.55
PKP4-203ENST00000411900 MRPS9P82933 396 aaKnown RBP11.59□□□□□ -0.55
PKP4-203ENST00000411900 MFSD10Q14728 455 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms