RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 CCDC42Q96M95 316 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 LTBP1Q14766 1721 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 ANO9A1A5B4 782 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 F8W031 263 aaPredicted RBP17.66■□□□□ 0.42
HOXD3-202ENST00000410016 RIMBP2O15034 1052 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
HOXD3-202ENST00000410016 IPO7O95373 1038 aaKnown RBP17.66■□□□□ 0.42
HOXD3-202ENST00000410016 GYS2P54840 703 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 PSMD2Q13200 908 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 ADAM21Q9UKJ8 722 aa17.66■□□□□ 0.42
HOXD3-202ENST00000410016 MYO3BQ8WXR4 1341 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 IDEP14735 1019 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 CASP8Q14790 479 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 CCDC84Q86UT8 332 aaPredicted RBP17.65■□□□□ 0.42
HOXD3-202ENST00000410016 GJA10Q969M2 543 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 GBP3Q9H0R5 595 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 FAM207AQ9NSI2 230 aaPredicted RBP17.65■□□□□ 0.42
HOXD3-202ENST00000410016 DDX25Q9UHL0 483 aaKnown RBP17.65■□□□□ 0.42
HOXD3-202ENST00000410016 CCDC66A2RUB6 948 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 LCA5LO95447 670 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 HOXA7P31268 230 aaPredicted RBP17.65■□□□□ 0.42
HOXD3-202ENST00000410016 SLC16A2P36021 539 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 KIF5AQ12840 1032 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 TAF3Q5VWG9 929 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 USP40Q9NVE5 1235 aa17.65■□□□□ 0.42
HOXD3-202ENST00000410016 UBR3Q6ZT12 1888 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 MACROD2A1Z1Q3 448 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 USP17L10C9JJH3 530 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 PDE2AO00408 941 aaPredicted RBP17.64■□□□□ 0.41
HOXD3-202ENST00000410016 ZBTB5O15062 677 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 FGFR1OPO95684 399 aaKnown RBP17.64■□□□□ 0.41
HOXD3-202ENST00000410016 LRRC41Q15345 812 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 ZCWPW2Q504Y3 356 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 C2CD5Q86YS7 1000 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 BAP1Q92560 729 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 CUL5Q93034 780 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 MXD3Q9BW11 206 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 LRRC27Q9C0I9 530 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 ATF5Q9Y2D1 282 aaPredicted RBP17.64■□□□□ 0.41
HOXD3-202ENST00000410016 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 PPEF1O14829 653 aaPredicted RBP17.64■□□□□ 0.41
HOXD3-202ENST00000410016 ZNF185O15231 689 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 N4BP1O75113 896 aaKnown RBP17.64■□□□□ 0.41
HOXD3-202ENST00000410016 MRPL12P52815 198 aaKnown RBP17.64■□□□□ 0.41
HOXD3-202ENST00000410016 SPA17Q15506 151 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 HYIQ5T013 277 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
HOXD3-202ENST00000410016 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 RPGRIP1Q96KN7 1286 aa17.64■□□□□ 0.41
HOXD3-202ENST00000410016 LRRIQ3A6PVS8 624 aaPredicted RBP17.63■□□□□ 0.41
HOXD3-202ENST00000410016 SLURP2P0DP57 97 aa17.63■□□□□ 0.41
HOXD3-202ENST00000410016 APOBEC3HQ6NTF7 200 aaKnown RBP17.63■□□□□ 0.41
HOXD3-202ENST00000410016 CDC42EP5Q6NZY7 148 aa17.63■□□□□ 0.41
HOXD3-202ENST00000410016 SECISBP2LQ93073 1101 aaKnown RBP17.63■□□□□ 0.41
HOXD3-202ENST00000410016 CAPZA3Q96KX2 299 aa17.63■□□□□ 0.41
HOXD3-202ENST00000410016 TSGA10Q9BZW7 698 aa17.63■□□□□ 0.41
HOXD3-202ENST00000410016 MMRN2Q9H8L6 949 aa17.63■□□□□ 0.41
HOXD3-202ENST00000410016 PSTPIP2Q9H939 334 aa17.63■□□□□ 0.41
HOXD3-202ENST00000410016 PCDHA12Q9UN75 941 aa17.63■□□□□ 0.41
HOXD3-202ENST00000410016 PCDHA13Q9Y5I0 950 aa17.63■□□□□ 0.41
HOXD3-202ENST00000410016 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 NEK11Q8NG66 645 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 EXOC4Q96A65 974 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 PSD3Q9NYI0 1048 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 TARSL2A2RTX5 802 aaKnown RBP17.62■□□□□ 0.41
HOXD3-202ENST00000410016 UBAP1LF5GYI3 381 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 EIF4A3P38919 411 aaKnown RBP17.62■□□□□ 0.41
HOXD3-202ENST00000410016 KIF11P52732 1056 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 KCNMA1Q12791 1236 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 COASYQ13057 564 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 SEPT2Q15019 361 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 ASTE1Q2TB18 679 aaPredicted RBP17.62■□□□□ 0.41
HOXD3-202ENST00000410016 PROM2Q8N271 834 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 SMCR8Q8TEV9 937 aaPredicted RBP17.62■□□□□ 0.41
HOXD3-202ENST00000410016 IFIH1Q9BYX4 1025 aaKnown RBP17.62■□□□□ 0.41
HOXD3-202ENST00000410016 SH2D4AQ9H788 454 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 CAPN6Q9Y6Q1 641 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
HOXD3-202ENST00000410016 LRRC53A6NM62 1247 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 GCFC2P16383 781 aaKnown RBP17.61■□□□□ 0.41
HOXD3-202ENST00000410016 ERCC3P19447 782 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 SCNN1DP51172 638 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 CKAP4Q07065 602 aaKnown RBP17.61■□□□□ 0.41
HOXD3-202ENST00000410016 GPS2Q13227 327 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 RRAGAQ7L523 313 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 CREG2Q8IUH2 290 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 MYOCDQ8IZQ8 938 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 CCDC155Q8N6L0 562 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 TRIM58Q8NG06 486 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 JRKLQ9Y4A0 524 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 PCDHA2Q9Y5H9 948 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 EIF3JO75822 258 aaKnown RBP17.61■□□□□ 0.41
HOXD3-202ENST00000410016 NFIAQ12857 509 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 CCDC96Q2M329 555 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 SEPT12Q8IYM1 358 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 FGFBP2Q9BYJ0 223 aa17.61■□□□□ 0.41
HOXD3-202ENST00000410016 ZC3H12CQ9C0D7 883 aaKnown RBP17.61■□□□□ 0.41
HOXD3-202ENST00000410016 SNX12Q9UMY4 172 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms