RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 FBXO11Q86XK2 927 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 IGDCC4Q8TDY8 1250 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 IRX2Q9BZI1 471 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-202ENST00000373779 BSDC1Q9NW68 430 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-202ENST00000373779 NT5C2P49902 561 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 CYP4A11Q02928 519 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 PDIA6Q15084 440 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 C10orf76Q5T2E6 689 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 GPATCH4Q5T3I0 446 aaKnown RBP19.05■□□□□ 0.64
PTPRU-202ENST00000373779 RABGAP1Q9Y3P9 1069 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 RIPOR2Q9Y4F9 1068 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 TOM1O60784 492 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 GGCXP38435 758 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 ATP2C1P98194 919 aaPredicted RBP19.05■□□□□ 0.64
PTPRU-202ENST00000373779 COA7Q96BR5 231 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 HARSP12081 509 aaKnown RBP19.05■□□□□ 0.64
PTPRU-202ENST00000373779 KRT15P19012 456 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 NR1D1P20393 614 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 CYP2C19P33261 490 aa19.05■□□□□ 0.64
PTPRU-202ENST00000373779 UHMK1Q8TAS1 419 aaKnown RBP19.05■□□□□ 0.64
PTPRU-202ENST00000373779 MAK16Q9BXY0 300 aaKnown RBP19.05■□□□□ 0.64
PTPRU-202ENST00000373779 PCK1P35558 622 aa19.04■□□□□ 0.64
PTPRU-202ENST00000373779 USP14P54578 494 aa19.04■□□□□ 0.64
PTPRU-202ENST00000373779 TC2NQ8N9U0 490 aa19.04■□□□□ 0.64
PTPRU-202ENST00000373779 HDAC6Q9UBN7 1215 aa19.04■□□□□ 0.64
PTPRU-202ENST00000373779 MAGEA9P43362 315 aa19.04■□□□□ 0.64
PTPRU-202ENST00000373779 STRN3Q13033 797 aa19.04■□□□□ 0.64
PTPRU-202ENST00000373779 TRIM28Q13263 835 aaKnown RBP19.04■□□□□ 0.64
PTPRU-202ENST00000373779 NFU1Q9UMS0 254 aa19.04■□□□□ 0.64
PTPRU-202ENST00000373779 GLE1Q53GS7 698 aaKnown RBP19.04■□□□□ 0.64
PTPRU-202ENST00000373779 PNPLA7Q6ZV29 1317 aa19.04■□□□□ 0.64
PTPRU-202ENST00000373779 MRPS25P82663 173 aaKnown RBP19.03■□□□□ 0.64
PTPRU-202ENST00000373779 NR1I3Q14994 352 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 UNC13DQ70J99 1090 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 LMNTD2Q8IXW0 634 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 GSPT2Q8IYD1 628 aaKnown RBP19.03■□□□□ 0.64
PTPRU-202ENST00000373779 IWS1Q96ST2 819 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 EMILIN3Q9NT22 766 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 K7ENM7 598 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 CYP2D6P10635 497 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 MYCLP12524 364 aaPredicted RBP19.03■□□□□ 0.64
PTPRU-202ENST00000373779 TBC1D8O95759 1140 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 TTLL1O95922 423 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 SNCBQ16143 134 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 SLFN13Q68D06 897 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 MIER3Q7Z3K6 550 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 GRK7Q8WTQ7 553 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 LIMA1Q9UHB6 759 aaKnown RBP19.03■□□□□ 0.64
PTPRU-202ENST00000373779 SPATA31A3Q5VYP0 1347 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 DIP2AQ14689 1571 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 A0A1W2PQC6 194 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 NMT2O60551 498 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 PLA2G12BQ9BX93 195 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 DKC1O60832 514 aaKnown RBP eCLIP19.03■□□□□ 0.644e-7■■■■■ 29.5
PTPRU-202ENST00000373779 VSNL1P62760 191 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 HPS5Q9UPZ3 1129 aa19.03■□□□□ 0.64
PTPRU-202ENST00000373779 FOSP01100 380 aaPredicted RBP19.02■□□□□ 0.64
PTPRU-202ENST00000373779 MYL7Q01449 175 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 CEP63Q96MT8 703 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 DAAM1Q9Y4D1 1078 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 MROH1Q8NDA8 1641 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 SLC8A1P32418 973 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 ZNF131P52739 623 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 KLHL14Q9P2G3 628 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 PASKQ96RG2 1323 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 TECPR2O15040 1411 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 ADAMTS13Q76LX8 1427 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 CERKLQ49MI3 558 aaPredicted RBP19.02■□□□□ 0.64
PTPRU-202ENST00000373779 RASGRP2Q7LDG7 609 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 STK38LQ9Y2H1 464 aa19.02■□□□□ 0.64
PTPRU-202ENST00000373779 PSMC2P35998 433 aaKnown RBP19.02■□□□□ 0.63
PTPRU-202ENST00000373779 CCDC197Q8NCU1 140 aa19.02■□□□□ 0.63
PTPRU-202ENST00000373779 KAZALD1Q96I82 304 aa19.02■□□□□ 0.63
PTPRU-202ENST00000373779 L2HGDHQ9H9P8 463 aa19.02■□□□□ 0.63
PTPRU-202ENST00000373779 EFCC1Q9HA90 598 aa19.02■□□□□ 0.63
PTPRU-202ENST00000373779 MLXIPQ9HAP2 919 aa19.02■□□□□ 0.63
PTPRU-202ENST00000373779 HMGB1P1B2RPK0 211 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 ATP1A1P05023 1023 aaKnown RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 KIFC2Q96AC6 838 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 ATP8A1Q9Y2Q0 1164 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 LRRC53A6NM62 1247 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 EIF3CLB5ME19 914 aaKnown RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 ADCY8P40145 1251 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 DCUN1D2Q6PH85 259 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 ITIH6Q6UXX5 1313 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 MYCBPQ99417 103 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 EIF3CQ99613 913 aaKnown RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 CIB2O75838 187 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 PLA2G4BP0C869 781 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 ICA1Q05084 483 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 DHX9Q08211 1270 aaKnown RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 FAM186BQ8IYM0 893 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 VPS37BQ9H9H4 285 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 INTS9Q9NV88 658 aaKnown RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 ADD3Q9UEY8 706 aaKnown RBP19.01■□□□□ 0.63
PTPRU-202ENST00000373779 SCNN1DP51172 638 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 ST3GAL1Q11201 340 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 DIXDC1Q155Q3 683 aa19.01■□□□□ 0.63
PTPRU-202ENST00000373779 NDC80O14777 642 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms