RNA–Protein interactions for RNA: ENST00000365052.1

RNU1-43P-201, Transcript of RNA, U1 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU1-43P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-43P-201ENST00000365052 BRDTQ58F21 947 aaPredicted RBP6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 BMP2KLQ5H9B9 411 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 TMEM240Q5SV17 173 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 ZNF697Q5TEC3 545 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 FAM109BQ6ICB4 259 aaPredicted RBP6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 CCDC62Q6P9F0 684 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 USP17L6PQ6QN14 398 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 OTOP2Q7RTS6 562 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 DEFB128Q7Z7B8 93 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 TMTC2Q8N394 836 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 IL31RAQ8NI17 732 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 CTCFLQ8NI51 663 aaPredicted RBP6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 RRP36Q96EU6 259 aaKnown RBP6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 TMEM87BQ96K49 555 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 NEK1Q96PY6 1258 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 IWS1Q96ST2 819 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 PDCD2LQ9BRP1 358 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 MTG1Q9BT17 334 aaPredicted RBP6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 ALDH8A1Q9H2A2 487 aaPredicted RBP6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 SEMA6BQ9H3T3 888 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 DDX41Q9UJV9 622 aaKnown RBP6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 TBX21Q9UL17 535 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 MRVI1Q9Y6F6 885 aa6.12□□□□□ -1.43
RNU1-43P-201ENST00000365052 LRRC37A2A6NM11 1700 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 A6NJR5 290 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 ZBBXA8MT70 800 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 EIF3JO75822 258 aaKnown RBP6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 RGS20O76081 388 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 GGPS1O95749 300 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 MMP3P08254 477 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 CASTP20810 708 aaKnown RBP6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 SP2Q02086 613 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 ARHGAP1Q07960 439 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 SYNE3Q6ZMZ3 975 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 VSIG10LQ86VR7 867 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 RASEFQ8IZ41 740 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 FANCBQ8NB91 859 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 SMARCC2Q8TAQ2 1214 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 MYLIPQ8WY64 445 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 CUL5Q93034 780 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 MLXIPQ9HAP2 919 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 IL23AQ9NPF7 189 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 NOD1Q9Y239 953 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 SLC12A7Q9Y666 1083 aa6.11□□□□□ -1.43
RNU1-43P-201ENST00000365052 RANBP2P49792 3224 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 KIAA1217Q5T5P2 1943 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 KPNA6O60684 536 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 CDC45O75419 566 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 DDAH1O94760 285 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 SUPT20HL2P0C7V6 817 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 CCND2P30279 289 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 KIF5BP33176 963 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 PBX2P40425 430 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 PSEN2P49810 448 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 GNAQP50148 359 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 MRPS9P82933 396 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 SMAD3P84022 425 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 FGD1P98174 961 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 ZNF200P98182 395 aaPredicted RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 EXOSC10Q01780 885 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 SP4Q02446 784 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 TRAF1Q13077 416 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 PTGISQ16647 500 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 UBE2SQ16763 222 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 HSDL1Q3SXM5 330 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 UTP14CQ5TAP6 766 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 RNF20Q5VTR2 975 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 GDF6Q6KF10 455 aaPredicted RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 GPR153Q6NV75 609 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 CYFIP1Q7L576 1253 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 MICU3Q86XE3 530 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 RPUSD2Q8IZ73 545 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 RETREG2Q8NC44 543 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 PPM1EQ8WY54 764 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 KAT2BQ92831 832 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 SPATA33Q96N06 139 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 CDX2Q99626 313 aaPredicted RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 NOC4LQ9BVI4 516 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 SPZ1Q9BXG8 430 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 FTOQ9C0B1 505 aaKnown RBP eCLIP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 WNT8AQ9H1J5 351 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 TTYH1Q9H313 450 aaPredicted RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 MAP3K20Q9NYL2 800 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 CXXC1Q9P0U4 656 aaPredicted RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 HDAC6Q9UBN7 1215 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 SEC63Q9UGP8 760 aaKnown RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 BRPF3Q9ULD4 1205 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 TELO2Q9Y4R8 837 aa6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 V9GY48 417 aaPredicted RBP6.1□□□□□ -1.43
RNU1-43P-201ENST00000365052 TRIP12Q14669 1992 aaPredicted RBP6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 KLF18A0A0U1RQI7 1052 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 GOLGA8AA7E2F4 631 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 GOLGA8BA8MQT2 603 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 MEIS2O14770 477 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 PPFIA3O75145 1194 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 ZNF286BP0CG31 522 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 CALM1P0DP23 149 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 CALM2P0DP24 149 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 CALM3P0DP25 149 aa6.09□□□□□ -1.43
RNU1-43P-201ENST00000365052 MYOGP15173 224 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms