RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 IRS4O14654 1257 aaPredicted RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 SLC37A4O43826 429 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 PDE8BO95263 885 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 CFHP08603 1231 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 MSNP26038 577 aaKnown RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 ADD2P35612 726 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 RAB6CQ53S08 254 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 KAT5Q92993 513 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 DRC1Q96MC2 740 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 MAGEB5Q9BZ81 275 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 RAB6CQ9H0N0 254 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 CYP3A7-CYP3A51PA0A087WV96 503 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 ADM5C9JUS6 153 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 WNT10BO00744 389 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 ZBTB48P10074 688 aaPredicted RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 ANAPC15P60006 121 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 CDCA5Q96FF9 252 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 TM6SF1Q9BZW5 370 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 SLC4A4Q9Y6R1 1079 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 SFI1A8K8P3 1242 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 M0R2N6 131 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 SYF2O95926 243 aaKnown RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 ITGA4P13612 1032 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 SLC16A2P36021 539 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 PRCPP42785 496 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 AMPD2Q01433 879 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 ADCY2Q08462 1091 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 SEPT14Q6ZU15 432 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 REM2Q8IYK8 340 aaPredicted RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 MOCOSQ96EN8 888 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 SLC26A6Q9BXS9 759 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 MLXIPQ9HAP2 919 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 AATFQ9NY61 560 aaKnown RBP eCLIP6.43□□□□□ -1.38
CD47-201ENST00000355354 FEZ2Q9UHY8 353 aaPredicted RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 TUBE1Q9UJT0 475 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 MRPL42Q9Y6G3 142 aaKnown RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 SCN1AP35498 2009 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 UNC13CQ8NB66 2214 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 POTEMA6NI47 508 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 PHF20L1A8MW92 1017 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 ACTN1P12814 892 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 SSTR3P32745 418 aaPredicted RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 CTSWP56202 376 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 B4GALNT4Q76KP1 1039 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 SCN2AQ99250 2005 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 NUP88Q99567 741 aaPredicted RBP6.43□□□□□ -1.38
CD47-201ENST00000355354 ANK1P16157 1881 aa6.43□□□□□ -1.38
CD47-201ENST00000355354 MARCKSL1P49006 195 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 HERVK_113P62684 666 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 BEND6Q5SZJ8 279 aaPredicted RBP6.42□□□□□ -1.38
CD47-201ENST00000355354 TNS4Q8IZW8 715 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 TTLL13PA6NNM8 815 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 PTMAP06454 111 aaKnown RBP6.42□□□□□ -1.38
CD47-201ENST00000355354 CYP3A7P24462 503 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 ENOX2Q16206 610 aaKnown RBP6.42□□□□□ -1.38
CD47-201ENST00000355354 DPY19L2Q6NUT2 758 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 SLF1Q9BQI6 1058 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 ARHGAP20Q9P2F6 1191 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 CNOT7Q9UIV1 285 aaKnown RBP6.42□□□□□ -1.38
CD47-201ENST00000355354 PTPRZ1P23471 2315 aaPredicted RBP6.42□□□□□ -1.38
CD47-201ENST00000355354 SKAP2O75563 359 aaPredicted RBP6.42□□□□□ -1.38
CD47-201ENST00000355354 PTGDRQ13258 359 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 MICALL2Q8IY33 904 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 IFNL3Q8IZI9 196 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 ZNF579Q8NAF0 562 aaKnown RBP6.42□□□□□ -1.38
CD47-201ENST00000355354 POP1Q99575 1024 aaKnown RBP6.42□□□□□ -1.38
CD47-201ENST00000355354 FAM118BQ9BPY3 351 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 RFXAPO00287 272 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 SOX10P56693 466 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 STRIP1Q5VSL9 837 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 SLC35F6Q8N357 371 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 NETO2Q8NC67 525 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 BANK1Q8NDB2 785 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 PDE11AQ9HCR9 933 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 ADAM21Q9UKJ8 722 aa6.42□□□□□ -1.38
CD47-201ENST00000355354 IGF2BP3O00425 579 aaKnown RBP eCLIP6.41□□□□□ -1.38
CD47-201ENST00000355354 USP17L6PQ6QN14 398 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 CREBRFQ8IUR6 639 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 TAB2Q9NYJ8 693 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 ADD3Q9UEY8 706 aaKnown RBP6.41□□□□□ -1.38
CD47-201ENST00000355354 FLT1P17948 1338 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 HEATR1Q9H583 2144 aaKnown RBP6.41□□□□□ -1.38
CD47-201ENST00000355354 EME2A4GXA9 379 aaPredicted RBP6.41□□□□□ -1.38
CD47-201ENST00000355354 HMGN5P82970 282 aaKnown RBP6.41□□□□□ -1.38
CD47-201ENST00000355354 COL9A2Q14055 689 aaPredicted RBP6.41□□□□□ -1.38
CD47-201ENST00000355354 PRAMEF18Q5VWM3 479 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 KCTD16Q68DU8 428 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 ABCB6Q9NP58 842 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 TBC1D7Q9P0N9 293 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 L1RE1Q9UN81 338 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 NR2E3Q9Y5X4 410 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 MORC2Q9Y6X9 1032 aaPredicted RBP6.41□□□□□ -1.38
CD47-201ENST00000355354 PIEZO1Q92508 2521 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 A0A1W2PRG0 241 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 GLI1P08151 1106 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 CHRNB2P17787 502 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 ECHS1P30084 290 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 SAMD7Q7Z3H4 446 aa6.41□□□□□ -1.38
CD47-201ENST00000355354 FBXO33Q7Z6M2 555 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms