RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 PTH1RQ03431 593 aa19.62■□□□□ 0.73
SMN1-201ENST00000351205 TRDNQ13061 729 aa19.62■□□□□ 0.73
SMN1-201ENST00000351205 DDX41Q9UJV9 622 aaKnown RBP19.62■□□□□ 0.73
SMN1-201ENST00000351205 ZBTB5O15062 677 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 EIF3JO75822 258 aaKnown RBP19.61■□□□□ 0.73
SMN1-201ENST00000351205 NR3C2P08235 984 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 IQCF3P0C7M6 154 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 MYOGP15173 224 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 ATP2A2P16615 1042 aaKnown RBP19.61■□□□□ 0.73
SMN1-201ENST00000351205 CHMLP26374 656 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 RFC2P35250 354 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 GHRHRQ02643 423 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 ADGRE1Q14246 886 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 KAT2BQ92831 832 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 NOD1Q9Y239 953 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 PCDHA1Q9Y5I3 950 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
SMN1-201ENST00000351205 TRANK1O15050 2925 aa19.61■□□□□ 0.73
SMN1-201ENST00000351205 BFSP2Q13515 415 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 PTGISQ16647 500 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 SLC35G1Q2M3R5 365 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 PPP2R2DQ66LE6 453 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 HOMER1Q86YM7 354 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 RETREG2Q8NC44 543 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 RUFY2Q8WXA3 655 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 PPM1EQ8WY54 764 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 CTAGE1Q96RT6 745 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 SENP2Q9HC62 589 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 PRDM6Q9NQX0 595 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 PCDHA11Q9Y5I1 949 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 MRVI1Q9Y6F6 885 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 XIRP2A4UGR9 3374 aa19.6■□□□□ 0.73
SMN1-201ENST00000351205 IFIT3O14879 490 aaKnown RBP19.59■□□□□ 0.73
SMN1-201ENST00000351205 ACTN1P12814 892 aa19.59■□□□□ 0.73
SMN1-201ENST00000351205 CASTP20810 708 aaKnown RBP19.59■□□□□ 0.73
SMN1-201ENST00000351205 GRM4Q14833 912 aa19.59■□□□□ 0.73
SMN1-201ENST00000351205 DGKDQ16760 1214 aa19.59■□□□□ 0.73
SMN1-201ENST00000351205 GDF6Q6KF10 455 aaPredicted RBP19.59■□□□□ 0.73
SMN1-201ENST00000351205 SESTD1Q86VW0 696 aa19.59■□□□□ 0.73
SMN1-201ENST00000351205 EMID1Q96A84 441 aaPredicted RBP19.59■□□□□ 0.73
SMN1-201ENST00000351205 PDCD2LQ9BRP1 358 aa19.59■□□□□ 0.73
SMN1-201ENST00000351205 RGS20O76081 388 aa19.58■□□□□ 0.72
SMN1-201ENST00000351205 MYCLP12524 364 aaPredicted RBP19.58■□□□□ 0.72
SMN1-201ENST00000351205 IGFBP4P22692 258 aa19.58■□□□□ 0.72
SMN1-201ENST00000351205 HOXA13P31271 388 aaPredicted RBP19.58■□□□□ 0.72
SMN1-201ENST00000351205 IRX6P78412 446 aaPredicted RBP19.58■□□□□ 0.72
SMN1-201ENST00000351205 STOX1Q6ZVD7 989 aa19.58■□□□□ 0.72
SMN1-201ENST00000351205 PIGSQ96S52 555 aa19.58■□□□□ 0.72
SMN1-201ENST00000351205 RIOX1Q9H6W3 641 aa19.58■□□□□ 0.72
SMN1-201ENST00000351205 MAP3K20Q9NYL2 800 aaKnown RBP19.58■□□□□ 0.72
SMN1-201ENST00000351205 PTPRSQ13332 1948 aa19.58■□□□□ 0.72
SMN1-201ENST00000351205 ERICH2A1L162 156 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 E7EWF7 191 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 SGSM2O43147 1006 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 CYTH3O43739 400 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 ZNF286BP0CG31 522 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 TROAPQ12815 778 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 LAMC2Q13753 1193 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 CCDC85BQ15834 202 aaPredicted RBP19.57■□□□□ 0.72
SMN1-201ENST00000351205 RALYLQ86SE5 291 aaKnown RBP19.57■□□□□ 0.72
SMN1-201ENST00000351205 CCDC155Q8N6L0 562 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 IL31RAQ8NI17 732 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 PPTC7Q8NI37 304 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 CAGE1Q8TC20 777 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 AFAP1L1Q8TED9 768 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 SLC9A7Q96T83 725 aa19.57■□□□□ 0.72
SMN1-201ENST00000351205 FTOQ9C0B1 505 aaKnown RBP eCLIP19.57■□□□□ 0.72
SMN1-201ENST00000351205 CA3P07451 260 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 PSEN2P49810 448 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 WTAPQ15007 396 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 PGM5Q15124 567 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 TMEM67Q5HYA8 995 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 TJAP1Q5JTD0 557 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 VSIG10LQ86VR7 867 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 DHX37Q8IY37 1157 aaKnown RBP19.56■□□□□ 0.72
SMN1-201ENST00000351205 NCOA7Q8NI08 942 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 DHX38Q92620 1227 aaKnown RBP19.56■□□□□ 0.72
SMN1-201ENST00000351205 SYMPKQ92797 1274 aaKnown RBP19.56■□□□□ 0.72
SMN1-201ENST00000351205 HDAC6Q9UBN7 1215 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 GTF2IRD1Q9UHL9 959 aa19.56■□□□□ 0.72
SMN1-201ENST00000351205 GCOM1H8Y6P7 765 aaPredicted RBP19.55■□□□□ 0.72
SMN1-201ENST00000351205 F2P00734 622 aa19.55■□□□□ 0.72
SMN1-201ENST00000351205 POLR2MP0CAP2 368 aa19.55■□□□□ 0.72
SMN1-201ENST00000351205 MFSD10Q14728 455 aa19.55■□□□□ 0.72
SMN1-201ENST00000351205 SART3Q15020 963 aaKnown RBP19.55■□□□□ 0.72
SMN1-201ENST00000351205 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
SMN1-201ENST00000351205 SAMD3Q8N6K7 520 aa19.55■□□□□ 0.72
SMN1-201ENST00000351205 C7orf31Q8N865 590 aa19.55■□□□□ 0.72
SMN1-201ENST00000351205 ALG1Q9BT22 464 aa19.55■□□□□ 0.72
SMN1-201ENST00000351205 KATNAL1Q9BW62 490 aa19.55■□□□□ 0.72
SMN1-201ENST00000351205 HAS3O00219 553 aa19.54■□□□□ 0.72
SMN1-201ENST00000351205 SORBS3O60504 671 aa19.54■□□□□ 0.72
SMN1-201ENST00000351205 HOXD8P13378 290 aaPredicted RBP19.54■□□□□ 0.72
SMN1-201ENST00000351205 SELPP16109 830 aa19.54■□□□□ 0.72
SMN1-201ENST00000351205 ANTXR2P58335 489 aa19.54■□□□□ 0.72
SMN1-201ENST00000351205 TRAF1Q13077 416 aa19.54■□□□□ 0.72
SMN1-201ENST00000351205 GPNMBQ14956 572 aa19.54■□□□□ 0.72
SMN1-201ENST00000351205 KIAA0753Q2KHM9 967 aa19.54■□□□□ 0.72
SMN1-201ENST00000351205 KCNV1Q6PIU1 500 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms