RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 CASTP20810 708 aaKnown RBP21.12■□□□□ 0.97
TMEM88-201ENST00000301599 GNAQP50148 359 aa21.12■□□□□ 0.97
TMEM88-201ENST00000301599 CCL23P55773 120 aa21.12■□□□□ 0.97
TMEM88-201ENST00000301599 ARHGAP1Q07960 439 aa21.12■□□□□ 0.97
TMEM88-201ENST00000301599 GUCD1Q96NT3 240 aa21.12■□□□□ 0.97
TMEM88-201ENST00000301599 TRMT13Q9NUP7 481 aaKnown RBP21.12■□□□□ 0.97
TMEM88-201ENST00000301599 MRVI1Q9Y6F6 885 aa21.12■□□□□ 0.97
TMEM88-201ENST00000301599 LIFRP42702 1097 aa21.11■□□□□ 0.97
TMEM88-201ENST00000301599 LAMC2Q13753 1193 aa21.11■□□□□ 0.97
TMEM88-201ENST00000301599 RASIP1Q5U651 963 aa21.11■□□□□ 0.97
TMEM88-201ENST00000301599 RNF20Q5VTR2 975 aa21.11■□□□□ 0.97
TMEM88-201ENST00000301599 RRP36Q96EU6 259 aaKnown RBP21.11■□□□□ 0.97
TMEM88-201ENST00000301599 SPZ1Q9BXG8 430 aa21.11■□□□□ 0.97
TMEM88-201ENST00000301599 MYH6P13533 1939 aa21.11■□□□□ 0.97
TMEM88-201ENST00000301599 UMODL1Q5DID0 1318 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 TMEM265A0A087WTH1 108 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 SH2B2O14492 632 aaPredicted RBP21.1■□□□□ 0.97
TMEM88-201ENST00000301599 MMP3P08254 477 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 CALM1P0DP23 149 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 CALM2P0DP24 149 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 CALM3P0DP25 149 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 PGM5Q15124 567 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 DGKDQ16760 1214 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 FCHSD1Q86WN1 690 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 DHX37Q8IY37 1157 aaKnown RBP21.1■□□□□ 0.97
TMEM88-201ENST00000301599 PIBF1Q8WXW3 757 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 HERVK_113Q902F9 699 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 EMID1Q96A84 441 aaPredicted RBP21.1■□□□□ 0.97
TMEM88-201ENST00000301599 MYL10Q9BUA6 226 aa21.1■□□□□ 0.97
TMEM88-201ENST00000301599 MTIF3Q9H2K0 278 aaKnown RBP21.1■□□□□ 0.97
TMEM88-201ENST00000301599 NEFLP07196 543 aa21.09■□□□□ 0.97
TMEM88-201ENST00000301599 TGFB3P10600 412 aa21.09■□□□□ 0.97
TMEM88-201ENST00000301599 CYP2C9P11712 490 aa21.09■□□□□ 0.97
TMEM88-201ENST00000301599 CCND2P30279 289 aa21.09■□□□□ 0.97
TMEM88-201ENST00000301599 CHMP4BP1P59074 171 aa21.09■□□□□ 0.97
TMEM88-201ENST00000301599 SKAP1Q86WV1 359 aa21.09■□□□□ 0.97
TMEM88-201ENST00000301599 CDX2Q99626 313 aaPredicted RBP21.09■□□□□ 0.97
TMEM88-201ENST00000301599 WNT8AQ9H1J5 351 aa21.09■□□□□ 0.97
TMEM88-201ENST00000301599 TTYH1Q9H313 450 aaPredicted RBP21.09■□□□□ 0.97
TMEM88-201ENST00000301599 RGS20O76081 388 aa21.08■□□□□ 0.97
TMEM88-201ENST00000301599 RETREG2Q8NC44 543 aa21.08■□□□□ 0.97
TMEM88-201ENST00000301599 SEC63Q9UGP8 760 aaKnown RBP21.08■□□□□ 0.97
TMEM88-201ENST00000301599 NOD1Q9Y239 953 aa21.08■□□□□ 0.97
TMEM88-201ENST00000301599 SLC12A7Q9Y666 1083 aa21.08■□□□□ 0.97
TMEM88-201ENST00000301599 BAZ2BQ9UIF8 2168 aaKnown RBP21.07■□□□□ 0.96
TMEM88-201ENST00000301599 PPFIA4O75335 1185 aa21.07■□□□□ 0.96
TMEM88-201ENST00000301599 CUL5Q93034 780 aa21.07■□□□□ 0.96
TMEM88-201ENST00000301599 SCLYQ96I15 445 aa21.07■□□□□ 0.96
TMEM88-201ENST00000301599 LAMA2P24043 3122 aaKnown RBP21.07■□□□□ 0.96
TMEM88-201ENST00000301599 DNAJB2P25686 324 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 BFSP2Q13515 415 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 PTGISQ16647 500 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 CELF3Q5SZQ8 465 aaKnown RBP21.06■□□□□ 0.96
TMEM88-201ENST00000301599 MYSM1Q5VVJ2 828 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 SYNE3Q6ZMZ3 975 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 OTOP2Q7RTS6 562 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 SRBD1Q8N5C6 995 aaKnown RBP21.06■□□□□ 0.96
TMEM88-201ENST00000301599 FANCBQ8NB91 859 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 PPTC7Q8NI37 304 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 PPP1R13LQ8WUF5 828 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 KAT2BQ92831 832 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
TMEM88-201ENST00000301599 GRXCR1A8MXD5 290 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 CDC45O75419 566 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 STAM2O75886 525 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 PFKMP08237 780 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 SESTD1Q86VW0 696 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 SGMS1Q86VZ5 419 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 IL31RAQ8NI17 732 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 SMARCC2Q8TAQ2 1214 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 KATNAL1Q9BW62 490 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 SCN10AQ9Y5Y9 1956 aa21.05■□□□□ 0.96
TMEM88-201ENST00000301599 PITPNM1O00562 1244 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 PLEKHA8P1O95397 391 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 RFC2P35250 354 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 SP2Q02086 613 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 COL9A3Q14050 684 aaPredicted RBP21.04■□□□□ 0.96
TMEM88-201ENST00000301599 TSGA10IPQ3SY00 556 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 GNPTABQ3T906 1256 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 C7orf31Q8N865 590 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 TIFAQ96CG3 184 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 CCDC136Q96JN2 1154 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 ZFP91Q96JP5 570 aaPredicted RBP21.04■□□□□ 0.96
TMEM88-201ENST00000301599 SPATA33Q96N06 139 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 LRRC2Q9BYS8 371 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 ZNF576Q9H609 170 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 MLXIPQ9HAP2 919 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 CXXC1Q9P0U4 656 aaPredicted RBP21.04■□□□□ 0.96
TMEM88-201ENST00000301599 MSRAQ9UJ68 235 aa21.04■□□□□ 0.96
TMEM88-201ENST00000301599 PIK3CDO00329 1044 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 GGPS1O95749 300 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 RXRAP19793 462 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 PSEN2P49810 448 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 RAB30Q15771 203 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 USP17L6PQ6QN14 398 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 DHX32Q7L7V1 743 aaKnown RBP21.03■□□□□ 0.96
TMEM88-201ENST00000301599 CMTR1Q8N1G2 835 aaKnown RBP21.03■□□□□ 0.96
TMEM88-201ENST00000301599 CCDC155Q8N6L0 562 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 MYLIPQ8WY64 445 aa21.03■□□□□ 0.96
TMEM88-201ENST00000301599 PBX4Q9BYU1 374 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms