RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ATP6V1E2Q96A05 226 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 MED10Q9BTT4 135 aa16.08■□□□□ 0.17
SCN3B-201ENST00000299333 RGS12O14924 1447 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 OR52Z1P0C646 297 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 KIF11P52732 1056 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 BEND6Q5SZJ8 279 aaPredicted RBP16.08■□□□□ 0.16
SCN3B-201ENST00000299333 DEPTORQ8TB45 409 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 NGLY1Q96IV0 654 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 DNAJC17Q9NVM6 304 aaKnown RBP16.08■□□□□ 0.16
SCN3B-201ENST00000299333 ZMYM6O95789 1325 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 TAF5LO75529 589 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 DAB2P98082 770 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 TSTA3Q13630 321 aaPredicted RBP16.08■□□□□ 0.16
SCN3B-201ENST00000299333 FAM26FQ5R3K3 315 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 C6orf118Q5T5N4 469 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 GJA10Q969M2 543 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 METTL22Q9BUU2 404 aaPredicted RBP16.08■□□□□ 0.16
SCN3B-201ENST00000299333 ANO3Q9BYT9 981 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 A0A1W2PQ27 194 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 A0A1W2PQ64 194 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 A0A1W2PQD8 194 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 MMS19Q96T76 1030 aa16.08■□□□□ 0.16
SCN3B-201ENST00000299333 UPF3AQ9H1J1 476 aaKnown RBP16.08■□□□□ 0.16
SCN3B-201ENST00000299333 NHEJ1Q9H9Q4 299 aaPredicted RBP16.08■□□□□ 0.16
SCN3B-201ENST00000299333 TMOD1P28289 359 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 TMED10P49755 219 aaKnown RBP16.07■□□□□ 0.16
SCN3B-201ENST00000299333 PSMC1P62191 440 aaKnown RBP16.07■□□□□ 0.16
SCN3B-201ENST00000299333 TSPY1Q01534 308 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 PCDHA12Q9UN75 941 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 MAPK4P31152 587 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 GGCXP38435 758 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 LIG4P49917 911 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 GRM1Q13255 1194 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 PTGDRQ13258 359 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 PBKQ96KB5 322 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 UTP6Q9NYH9 597 aaKnown RBP16.07■□□□□ 0.16
SCN3B-201ENST00000299333 STOML1Q9UBI4 398 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 RNF14Q9UBS8 474 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 ANGPTL3Q9Y5C1 460 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 ACSL3O95573 720 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 DR1Q01658 176 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 FAM178BQ8IXR5 827 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 ENOX1Q8TC92 643 aaKnown RBP16.07■□□□□ 0.16
SCN3B-201ENST00000299333 ZNF653Q96CK0 615 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 SMYD3Q9H7B4 428 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 PLCH2O75038 1416 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 HNRNPCL2B2RXH8 293 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 ZBTB22O15209 634 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 HNRNPCL1O60812 293 aaKnown RBP16.07■□□□□ 0.16
SCN3B-201ENST00000299333 ACTN1P12814 892 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 BASP1P80723 227 aaKnown RBP16.07■□□□□ 0.16
SCN3B-201ENST00000299333 MYL7Q01449 175 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 PPARAQ07869 468 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 RGS9BPQ6ZS82 235 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 SPATA5Q8NB90 893 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 RTEL1Q9NZ71 1219 aa16.07■□□□□ 0.16
SCN3B-201ENST00000299333 PFDN6O15212 129 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 MFSD4BQ5TF39 518 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 NSMFQ6X4W1 530 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 RINLQ6ZS11 566 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 ZNF277Q9NRM2 450 aaPredicted RBP16.06■□□□□ 0.16
SCN3B-201ENST00000299333 IPO11Q9UI26 975 aaKnown RBP16.06■□□□□ 0.16
SCN3B-201ENST00000299333 DYNLT1P63172 113 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 ADCY2Q08462 1091 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 CCDC15Q0P6D6 951 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 SCRN1Q12765 414 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 CC2D1AQ6P1N0 951 aaPredicted RBP16.06■□□□□ 0.16
SCN3B-201ENST00000299333 FAM47EQ6ZV65 393 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 FBXL13Q8NEE6 735 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 CSRNP1Q96S65 589 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 ARIH1Q9Y4X5 557 aaPredicted RBP16.06■□□□□ 0.16
SCN3B-201ENST00000299333 SSH2Q76I76 1423 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 A6NJR5 290 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 E9PMD0 336 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 POLR2BP30876 1174 aaKnown RBP16.06■□□□□ 0.16
SCN3B-201ENST00000299333 RWDD2BP57060 319 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 EMBQ6PCB8 327 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 VSTM4Q8IW00 320 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 FAM133AQ8N9E0 248 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 KIF2CQ99661 725 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 ENO4A6NNW6 628 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 ARMCX5Q6P1M9 558 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 FAM186BQ8IYM0 893 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 CFAP36Q96G28 342 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 GSDMAQ96QA5 445 aa16.06■□□□□ 0.16
SCN3B-201ENST00000299333 PPARGC1AQ9UBK2 798 aaKnown RBP16.06■□□□□ 0.16
SCN3B-201ENST00000299333 OATP04181 439 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 SPOPLQ6IQ16 392 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 GPKOWQ92917 476 aaPredicted RBP eCLIP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 PGBD1Q96JS3 809 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 TMOD4Q9NZQ9 345 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 UHRF1BP1Q6BDS2 1440 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 COL17A1Q9UMD9 1497 aaPredicted RBP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
SCN3B-201ENST00000299333 NDUFA10O95299 355 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 C1orf146Q5VVC0 180 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 PCGF5Q86SE9 256 aa16.05■□□□□ 0.16
SCN3B-201ENST00000299333 MAPKAPK5Q8IW41 473 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms