RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR42, Length 351 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR42	snR42	RPL11B	Q3E757	174 aa	Predicted RBP	3.11	□□□□□ -1.91
snR42	snR42	NOP14	Q99207	810 aa	Known RBP	3.11	□□□□□ -1.91
snR42	snR42	BRR2	P32639	2163 aa	Known RBP	3.11	□□□□□ -1.91
snR42	snR42	STE2	D6VTK4	431 aa		3.1	□□□□□ -1.91
snR42	snR42	MDM35	O60200	86 aa		3.1	□□□□□ -1.91
snR42	snR42	ILS1	P09436	1072 aa	Known RBP	3.1	□□□□□ -1.91
snR42	snR42	LAT1	P12695	482 aa	Known RBP	3.1	□□□□□ -1.91
snR42	snR42	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
snR42	snR42	RPB4	P20433	221 aa	Predicted RBP	3.1	□□□□□ -1.91
snR42	snR42	MRPL25	P23369	157 aa		3.1	□□□□□ -1.91
snR42	snR42	PTP1	P25044	335 aa		3.1	□□□□□ -1.91
snR42	snR42	TPS2	P31688	896 aa	Known RBP	3.1	□□□□□ -1.91
snR42	snR42	MEI5	P32489	222 aa		3.1	□□□□□ -1.91
snR42	snR42	GDA1	P32621	518 aa		3.1	□□□□□ -1.91
snR42	snR42	CDC13	P32797	924 aa	Known RBP	3.1	□□□□□ -1.91
snR42	snR42	SRP101	P32916	621 aa		3.1	□□□□□ -1.91
snR42	snR42	PDR3	P33200	976 aa		3.1	□□□□□ -1.91
snR42	snR42	SFC1	P33303	322 aa		3.1	□□□□□ -1.91
snR42	snR42	TIP20	P33891	701 aa		3.1	□□□□□ -1.91
snR42	snR42	SKT5	P34226	696 aa		3.1	□□□□□ -1.91
snR42	snR42	MTH1	P35198	433 aa		3.1	□□□□□ -1.91
snR42	snR42	YPT52	P36018	234 aa	Known RBP	3.1	□□□□□ -1.91
snR42	snR42	SPP381	P38282	291 aa	Predicted RBP	3.1	□□□□□ -1.91
snR42	snR42	YHR033W	P38690	423 aa		3.1	□□□□□ -1.91
snR42	snR42	YHI9	P38765	294 aa		3.1	□□□□□ -1.91
snR42	snR42	HAT2	P39984	401 aa		3.1	□□□□□ -1.91
snR42	snR42	HOS4	P40480	1083 aa		3.1	□□□□□ -1.91
snR42	snR42	YNL320W	P42840	284 aa		3.1	□□□□□ -1.91
snR42	snR42	ALR2	P43553	858 aa		3.1	□□□□□ -1.91
snR42	snR42	SGF73	P53165	657 aa		3.1	□□□□□ -1.91
snR42	snR42	YGR012W	P53206	393 aa		3.1	□□□□□ -1.91
snR42	snR42	KTR5	P53966	522 aa	Predicted RBP	3.1	□□□□□ -1.91
snR42	snR42	RPL22B	P56628	122 aa	Known RBP	3.1	□□□□□ -1.91
snR42	snR42	NHP10	Q03435	203 aa		3.1	□□□□□ -1.91
snR42	snR42	TAF12	Q03761	539 aa		3.1	□□□□□ -1.91
snR42	snR42	STP3	Q05937	343 aa		3.1	□□□□□ -1.91
snR42	snR42	BSC6	Q08280	497 aa		3.1	□□□□□ -1.91
snR42	snR42	YDR061W	Q12298	539 aa		3.1	□□□□□ -1.91
snR42	snR42	WHI5	Q12416	295 aa		3.1	□□□□□ -1.91
snR42	snR42	YIL046W-A	Q3E7Z4	54 aa		3.1	□□□□□ -1.91
snR42	snR42	SRN2	Q99176	213 aa		3.1	□□□□□ -1.91
snR42	snR42	TEL1	P38110	2787 aa		3.09	□□□□□ -1.91
snR42	snR42	RAD1	P06777	1100 aa		3.09	□□□□□ -1.91
snR42	snR42	CDC21	P06785	304 aa		3.09	□□□□□ -1.91
snR42	snR42	SEC53	P07283	254 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	RSR1	P13856	272 aa		3.09	□□□□□ -1.91
snR42	snR42	YSR3	P23501	404 aa		3.09	□□□□□ -1.91
snR42	snR42	PHO3	P24031	467 aa		3.09	□□□□□ -1.91
snR42	snR42	SEC14	P24280	304 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	DBP2	P24783	546 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
snR42	snR42	SKN1	P33336	771 aa		3.09	□□□□□ -1.91
snR42	snR42	PTH2	P34222	208 aa		3.09	□□□□□ -1.91
snR42	snR42	YKL100C	P34248	587 aa		3.09	□□□□□ -1.91
snR42	snR42	LAS1	P36146	502 aa	Predicted RBP	3.09	□□□□□ -1.91
snR42	snR42	UBS1	P38290	277 aa		3.09	□□□□□ -1.91
snR42	snR42	EHT1	P38295	451 aa		3.09	□□□□□ -1.91
snR42	snR42	YHR020W	P38708	688 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	INM1	P38710	295 aa		3.09	□□□□□ -1.91
snR42	snR42	YHR127W	P38833	243 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	YJL206C	P39529	758 aa		3.09	□□□□□ -1.91
snR42	snR42	FAU1	P40099	211 aa		3.09	□□□□□ -1.91
snR42	snR42	LRO1	P40345	661 aa		3.09	□□□□□ -1.91
snR42	snR42	URM1	P40554	99 aa	Predicted RBP	3.09	□□□□□ -1.91
snR42	snR42	YRB1	P41920	201 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	SAE2	P46946	345 aa		3.09	□□□□□ -1.91
snR42	snR42	PMT3	P47190	753 aa		3.09	□□□□□ -1.91
snR42	snR42	TRM9	P49957	279 aa		3.09	□□□□□ -1.91
snR42	snR42	COS12	P53053	380 aa		3.09	□□□□□ -1.91
snR42	snR42	ZIP2	P53061	704 aa		3.09	□□□□□ -1.91
snR42	snR42	BOL2	P53082	120 aa		3.09	□□□□□ -1.91
snR42	snR42	ERG26	P53199	349 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	CLD1	P53264	445 aa		3.09	□□□□□ -1.91
snR42	snR42	ESF2	P53743	316 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	CSL4	P53859	292 aa	Predicted RBP	3.09	□□□□□ -1.91
snR42	snR42	PRO2	P54885	456 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	RHO3	Q00245	231 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	TRM12	Q04235	462 aa		3.09	□□□□□ -1.91
snR42	snR42	YLR177W	Q06251	628 aa		3.09	□□□□□ -1.91
snR42	snR42	CDA1	Q06702	301 aa		3.09	□□□□□ -1.91
snR42	snR42	VHS3	Q08438	674 aa		3.09	□□□□□ -1.91
snR42	snR42	DIN7	Q12086	430 aa		3.09	□□□□□ -1.91
snR42	snR42	CHS5	Q12114	671 aa	Known RBP	3.09	□□□□□ -1.91
snR42	snR42	MRH1	Q12117	320 aa	Predicted RBP	3.09	□□□□□ -1.91
snR42	snR42	YOR114W	Q12219	294 aa		3.09	□□□□□ -1.91
snR42	snR42	UBX3	Q12229	455 aa		3.09	□□□□□ -1.91
snR42	snR42	ICT1	Q12385	394 aa		3.09	□□□□□ -1.91
snR42	snR42	LAG2	Q92325	660 aa		3.09	□□□□□ -1.91
snR42	snR42	BRR1	Q99177	341 aa	Predicted RBP	3.09	□□□□□ -1.91
snR42	snR42	HSH49	Q99181	213 aa	Predicted RBP	3.09	□□□□□ -1.91
snR42	snR42	BCY1	P07278	416 aa	Known RBP	3.08	□□□□□ -1.92
snR42	snR42	TRP4	P07285	380 aa	Predicted RBP	3.08	□□□□□ -1.92
snR42	snR42	FUM1	P08417	488 aa	Known RBP	3.08	□□□□□ -1.92
snR42	snR42	YAR066W	P0CX18	203 aa		3.08	□□□□□ -1.92
snR42	snR42	YHR214W	P0CX19	203 aa		3.08	□□□□□ -1.92
snR42	snR42	PEP5	P12868	1029 aa		3.08	□□□□□ -1.92
snR42	snR42	CLN2	P20438	545 aa		3.08	□□□□□ -1.92
snR42	snR42	NTH1	P32356	751 aa		3.08	□□□□□ -1.92
snR42	snR42	RIM1	P32445	135 aa	Known RBP	3.08	□□□□□ -1.92
snR42	snR42	PTM1	P32857	523 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms