RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C YHR131CP38835 850 aa3.54□□□□□ -1.84
RPA43YOR340C YER130CP39959 443 aa3.54□□□□□ -1.84
RPA43YOR340C MRX1P40050 688 aa3.54□□□□□ -1.84
RPA43YOR340C HYR1P40581 163 aaKnown RBP3.54□□□□□ -1.84
RPA43YOR340C LCB2P40970 561 aa3.54□□□□□ -1.84
RPA43YOR340C PSA1P41940 361 aaKnown RBP3.54□□□□□ -1.84
RPA43YOR340C BNA3P47039 444 aaKnown RBP3.54□□□□□ -1.84
RPA43YOR340C YPT11P48559 417 aa3.54□□□□□ -1.84
RPA43YOR340C STR3P53101 465 aaKnown RBP3.54□□□□□ -1.84
RPA43YOR340C CUL3P53202 744 aa3.54□□□□□ -1.84
RPA43YOR340C HST1P53685 503 aa3.54□□□□□ -1.84
RPA43YOR340C VTC3Q02725 835 aa3.54□□□□□ -1.84
RPA43YOR340C RSC9Q03124 581 aa3.54□□□□□ -1.84
RPA43YOR340C UTP21Q06078 939 aaPredicted RBP3.54□□□□□ -1.84
RPA43YOR340C YLR455WQ06188 304 aa3.54□□□□□ -1.84
RPA43YOR340C ECM7Q06200 448 aa3.54□□□□□ -1.84
RPA43YOR340C ICT1Q12385 394 aa3.54□□□□□ -1.84
RPA43YOR340C DDP1Q99321 188 aaKnown RBP3.54□□□□□ -1.84
RPA43YOR340C HXK2P04807 486 aaKnown RBP3.53□□□□□ -1.84
RPA43YOR340C ARD1P07347 238 aaPredicted RBP3.53□□□□□ -1.84
RPA43YOR340C YIH1P25637 258 aa3.53□□□□□ -1.84
RPA43YOR340C PSO2P30620 661 aa3.53□□□□□ -1.84
RPA43YOR340C CSE2P33308 149 aa3.53□□□□□ -1.84
RPA43YOR340C MNN2P38069 597 aa3.53□□□□□ -1.84
RPA43YOR340C MRX3P38172 270 aa3.53□□□□□ -1.84
RPA43YOR340C IMD2P38697 523 aaKnown RBP3.53□□□□□ -1.84
RPA43YOR340C UTP9P38882 575 aaKnown RBP3.53□□□□□ -1.84
RPA43YOR340C YER186CP40101 306 aa3.53□□□□□ -1.84
RPA43YOR340C RGI2P40188 164 aa3.53□□□□□ -1.84
RPA43YOR340C LAM5P43560 674 aa3.53□□□□□ -1.84
RPA43YOR340C YFR020WP43600 232 aa3.53□□□□□ -1.84
RPA43YOR340C IRC7P43623 340 aa3.53□□□□□ -1.84
RPA43YOR340C CTK2P46962 323 aa3.53□□□□□ -1.84
RPA43YOR340C IMD3P50095 523 aaKnown RBP3.53□□□□□ -1.84
RPA43YOR340C YPR003CP53394 754 aa3.53□□□□□ -1.84
RPA43YOR340C IDP3P53982 420 aaKnown RBP3.53□□□□□ -1.84
RPA43YOR340C BUD22Q04347 519 aaKnown RBP3.53□□□□□ -1.84
RPA43YOR340C CUR1Q06469 252 aa3.53□□□□□ -1.84
RPA43YOR340C SHS1Q07657 551 aa3.53□□□□□ -1.84
RPA43YOR340C YPL272CQ08984 517 aa3.53□□□□□ -1.84
RPA43YOR340C ATG9Q12142 997 aa3.53□□□□□ -1.84
RPA43YOR340C PET111P08468 800 aa3.52□□□□□ -1.85
RPA43YOR340C ROX1P25042 368 aa3.52□□□□□ -1.85
RPA43YOR340C RSA4P25382 515 aaKnown RBP3.52□□□□□ -1.85
RPA43YOR340C RPC53P25441 422 aa3.52□□□□□ -1.85
RPA43YOR340C PRR1P28708 518 aa3.52□□□□□ -1.85
RPA43YOR340C RKM3P38222 552 aa3.52□□□□□ -1.85
RPA43YOR340C DIA4P38705 446 aaPredicted RBP3.52□□□□□ -1.85
RPA43YOR340C CCT6P39079 546 aa3.52□□□□□ -1.85
RPA43YOR340C ERV46P39727 415 aa3.52□□□□□ -1.85
RPA43YOR340C YEL057CP39983 233 aa3.52□□□□□ -1.85
RPA43YOR340C BUR6P40096 142 aa3.52□□□□□ -1.85
RPA43YOR340C PKP1P40530 394 aa3.52□□□□□ -1.85
RPA43YOR340C CIN1P40987 1014 aa3.52□□□□□ -1.85
RPA43YOR340C MAF1P41910 395 aa3.52□□□□□ -1.85
RPA43YOR340C TOS3P43637 560 aa3.52□□□□□ -1.85
RPA43YOR340C DIA3P52290 468 aa3.52□□□□□ -1.85
RPA43YOR340C IST1P53843 298 aaPredicted RBP3.52□□□□□ -1.85
RPA43YOR340C YNL134CP53912 376 aaKnown RBP3.52□□□□□ -1.85
RPA43YOR340C SEC5P89102 971 aa3.52□□□□□ -1.85
RPA43YOR340C STP1Q00947 519 aa3.52□□□□□ -1.85
RPA43YOR340C CDD1Q06549 142 aa3.52□□□□□ -1.85
RPA43YOR340C YEH1Q07804 573 aa3.52□□□□□ -1.85
RPA43YOR340C TLG2Q08144 397 aa3.52□□□□□ -1.85
RPA43YOR340C BUD7Q08754 746 aa3.52□□□□□ -1.85
RPA43YOR340C RTN2Q12443 393 aa3.52□□□□□ -1.85
RPA43YOR340C YJR112W-AQ3E743 109 aa3.52□□□□□ -1.85
RPA43YOR340C YPT6Q99260 215 aa3.52□□□□□ -1.85
RPA43YOR340C YMR085WP0CF18 432 aa3.51□□□□□ -1.85
RPA43YOR340C MAK32P23060 363 aa3.51□□□□□ -1.85
RPA43YOR340C COQ3P27680 312 aa3.51□□□□□ -1.85
RPA43YOR340C ERG3P32353 365 aa3.51□□□□□ -1.85
RPA43YOR340C IME2P32581 645 aa3.51□□□□□ -1.85
RPA43YOR340C MUD1P32605 298 aaKnown RBP3.51□□□□□ -1.85
RPA43YOR340C BUD2P33314 1104 aa3.51□□□□□ -1.85
RPA43YOR340C YKT6P36015 200 aaKnown RBP3.51□□□□□ -1.85
RPA43YOR340C HEL1P36113 551 aa3.51□□□□□ -1.85
RPA43YOR340C SGN1P40561 250 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
RPA43YOR340C YIR016WP40572 265 aa3.51□□□□□ -1.85
RPA43YOR340C AIP1P46680 615 aaKnown RBP3.51□□□□□ -1.85
RPA43YOR340C DPB11P47027 764 aaPredicted RBP3.51□□□□□ -1.85
RPA43YOR340C HSH155P49955 971 aaKnown RBP3.51□□□□□ -1.85
RPA43YOR340C ALG11P53954 548 aaKnown RBP3.51□□□□□ -1.85
RPA43YOR340C YOL159CQ08300 171 aa3.51□□□□□ -1.85
RPA43YOR340C PKH2Q12236 1081 aaKnown RBP3.51□□□□□ -1.85
RPA43YOR340C INP53Q12271 1107 aa3.51□□□□□ -1.85
RPA43YOR340C CRC1Q12289 327 aa3.51□□□□□ -1.85
RPA43YOR340C MF(ALPHA)1P01149 165 aa3.5□□□□□ -1.85
RPA43YOR340C ASP3-2P0CX77 362 aa3.5□□□□□ -1.85
RPA43YOR340C ASP3-3P0CX78 362 aa3.5□□□□□ -1.85
RPA43YOR340C ASP3-4P0CX79 362 aa3.5□□□□□ -1.85
RPA43YOR340C ASP3-1P0CZ17 362 aa3.5□□□□□ -1.85
RPA43YOR340C MRP2P10663 115 aaPredicted RBP3.5□□□□□ -1.85
RPA43YOR340C YAP1P19880 650 aaKnown RBP3.5□□□□□ -1.85
RPA43YOR340C ADH7P25377 361 aa3.5□□□□□ -1.85
RPA43YOR340C MSP1P28737 362 aa3.5□□□□□ -1.85
RPA43YOR340C NPL6P32832 435 aa3.5□□□□□ -1.85
RPA43YOR340C SKG6P32900 734 aaPredicted RBP3.5□□□□□ -1.85
RPA43YOR340C RPC25P35718 212 aa3.5□□□□□ -1.85
RPA43YOR340C SNU114P36048 1008 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms