RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W RTT109Q07794 436 aa2.53□□□□□ -2
SWM2YNR004W YOL159CQ08300 171 aa2.53□□□□□ -2
SWM2YNR004W RPS10AQ08745 105 aaPredicted RBP2.53□□□□□ -2
SWM2YNR004W BUG1Q12191 341 aa2.53□□□□□ -2
SWM2YNR004W NCE102Q12207 173 aaRIP-Chip data2.53□□□□□ -2not detected
SWM2YNR004W YDL009CQ12210 107 aa2.53□□□□□ -2
SWM2YNR004W RLM1Q12224 676 aa2.53□□□□□ -2
SWM2YNR004W HSH49Q99181 213 aaPredicted RBP2.53□□□□□ -2
SWM2YNR004W SUC2P00724 532 aa2.52□□□□□ -2.01
SWM2YNR004W LEU4P06208 619 aaKnown RBP2.52□□□□□ -2.01
SWM2YNR004W PEP4P07267 405 aaKnown RBP2.52□□□□□ -2.01
SWM2YNR004W MRP13P12686 339 aa2.52□□□□□ -2.01
SWM2YNR004W ATR1P13090 542 aa2.52□□□□□ -2.01
SWM2YNR004W PMS1P14242 873 aa2.52□□□□□ -2.01
SWM2YNR004W MTF1P14908 341 aaKnown RBP2.52□□□□□ -2.01
SWM2YNR004W SEC1P30619 724 aaKnown RBP2.52□□□□□ -2.01
SWM2YNR004W PRO3P32263 286 aaKnown RBP2.52□□□□□ -2.01
SWM2YNR004W ECM15P35195 104 aa2.52□□□□□ -2.01
SWM2YNR004W MBB1P39534 108 aa2.52□□□□□ -2.01
SWM2YNR004W RPS10BP46784 105 aaKnown RBP2.52□□□□□ -2.01
SWM2YNR004W GUF1P46943 645 aa2.52□□□□□ -2.01
SWM2YNR004W YJL132WP47014 750 aa2.52□□□□□ -2.01
SWM2YNR004W PDS5Q04264 1277 aa2.52□□□□□ -2.01
SWM2YNR004W MRPL51Q06090 140 aaPredicted RBP2.52□□□□□ -2.01
SWM2YNR004W YDL057WQ07379 328 aa2.52□□□□□ -2.01
SWM2YNR004W PDH1Q12428 516 aaKnown RBP2.52□□□□□ -2.01
SWM2YNR004W RAV1P47104 1357 aa2.51□□□□□ -2.01
SWM2YNR004W APE1P14904 514 aa2.51□□□□□ -2.01
SWM2YNR004W GLK1P17709 500 aaKnown RBP2.51□□□□□ -2.01
SWM2YNR004W PMT1P33775 817 aa2.51□□□□□ -2.01
SWM2YNR004W PIM1P36775 1133 aa2.51□□□□□ -2.01
SWM2YNR004W OSH3P38713 996 aaKnown RBP2.51□□□□□ -2.01
SWM2YNR004W MDM31P38880 579 aa2.51□□□□□ -2.01
SWM2YNR004W KRE9P39005 276 aa2.51□□□□□ -2.01
SWM2YNR004W YEL057CP39983 233 aa2.51□□□□□ -2.01
SWM2YNR004W MKT1P40850 830 aaKnown RBP2.51□□□□□ -2.01
SWM2YNR004W DLD2P46681 530 aaKnown RBP2.51□□□□□ -2.01
SWM2YNR004W PKP2P53170 491 aa2.51□□□□□ -2.01
SWM2YNR004W ZPR1P53303 486 aaKnown RBP2.51□□□□□ -2.01
SWM2YNR004W IVY1Q04934 453 aa2.51□□□□□ -2.01
SWM2YNR004W RBS1Q05672 457 aaKnown RBP2.51□□□□□ -2.01
SWM2YNR004W SYO1Q07395 620 aa2.51□□□□□ -2.01
SWM2YNR004W PPT2Q12036 173 aa2.51□□□□□ -2.01
SWM2YNR004W SUP35P05453 685 aaKnown RBP2.5□□□□□ -2.01
SWM2YNR004W COR1P07256 457 aa2.5□□□□□ -2.01
SWM2YNR004W PDX1P16451 410 aa2.5□□□□□ -2.01
SWM2YNR004W GLN3P18494 730 aa2.5□□□□□ -2.01
SWM2YNR004W ERG3P32353 365 aa2.5□□□□□ -2.01
SWM2YNR004W PEX5P35056 612 aa2.5□□□□□ -2.01
SWM2YNR004W TIF4631P39935 952 aaKnown RBP2.5□□□□□ -2.01
SWM2YNR004W POP1P41812 875 aa2.5□□□□□ -2.01
SWM2YNR004W IKS1P47042 667 aa2.5□□□□□ -2.01
SWM2YNR004W COS5P47187 383 aa2.5□□□□□ -2.01
SWM2YNR004W OCA1P50946 238 aaPredicted RBP2.5□□□□□ -2.01
SWM2YNR004W LCL3P53153 274 aa2.5□□□□□ -2.01
SWM2YNR004W MNP1P53163 194 aaPredicted RBP2.5□□□□□ -2.01
SWM2YNR004W SLG1P54867 378 aa2.5□□□□□ -2.01
SWM2YNR004W YPL014WQ02606 381 aa2.5□□□□□ -2.01
SWM2YNR004W PNG1Q02890 363 aa2.5□□□□□ -2.01
SWM2YNR004W SLD5Q03406 294 aa2.5□□□□□ -2.01
SWM2YNR004W RRN11Q04712 507 aa2.5□□□□□ -2.01
SWM2YNR004W DON1Q05610 365 aa2.5□□□□□ -2.01
SWM2YNR004W RRP45Q05636 305 aaKnown RBP2.5□□□□□ -2.01
SWM2YNR004W COS7Q07788 383 aa2.5□□□□□ -2.01
SWM2YNR004W TLG2Q08144 397 aa2.5□□□□□ -2.01
SWM2YNR004W RTN2Q12443 393 aa2.5□□□□□ -2.01
SWM2YNR004W SGS1P35187 1447 aa2.5□□□□□ -2.01
SWM2YNR004W MET17P06106 444 aa2.49□□□□□ -2.01
SWM2YNR004W BAR1P12630 587 aa2.49□□□□□ -2.01
SWM2YNR004W AMD1P15274 810 aaKnown RBP2.49□□□□□ -2.01
SWM2YNR004W SRV2P17555 526 aaKnown RBP2.49□□□□□ -2.01
SWM2YNR004W AFG1P32317 509 aa2.49□□□□□ -2.01
SWM2YNR004W DBF4P32325 704 aa2.49□□□□□ -2.01
SWM2YNR004W PTR2P32901 601 aa2.49□□□□□ -2.01
SWM2YNR004W SIP2P34164 415 aaKnown RBP2.49□□□□□ -2.01
SWM2YNR004W PXA2P34230 853 aa2.49□□□□□ -2.01
SWM2YNR004W BYE1P36106 594 aa2.49□□□□□ -2.01
SWM2YNR004W SRO77P38163 1010 aa2.49□□□□□ -2.01
SWM2YNR004W FAU1P40099 211 aa2.49□□□□□ -2.01
SWM2YNR004W DOT5P40553 215 aa2.49□□□□□ -2.01
SWM2YNR004W SSU1P41930 458 aa2.49□□□□□ -2.01
SWM2YNR004W YGR149WP48236 432 aa2.49□□□□□ -2.01
SWM2YNR004W YML6P51998 286 aa2.49□□□□□ -2.01
SWM2YNR004W YGL242CP53066 181 aa2.49□□□□□ -2.01
SWM2YNR004W DSL1P53847 754 aa2.49□□□□□ -2.01
SWM2YNR004W SKO1Q02100 647 aa2.49□□□□□ -2.01
SWM2YNR004W KAP120Q02932 1032 aa2.49□□□□□ -2.01
SWM2YNR004W HOT1Q03213 719 aa2.49□□□□□ -2.01
SWM2YNR004W TAP42Q04372 366 aa2.49□□□□□ -2.01
SWM2YNR004W DIC1Q06143 298 aa2.49□□□□□ -2.01
SWM2YNR004W MUM3Q08750 479 aa2.49□□□□□ -2.01
SWM2YNR004W BSC1Q12140 328 aa2.49□□□□□ -2.01
SWM2YNR004W RRG1Q12167 365 aaPredicted RBP2.49□□□□□ -2.01
SWM2YNR004W YBR298C-AQ8TGK4 73 aa2.49□□□□□ -2.01
SWM2YNR004W HIS4P00815 799 aaKnown RBP2.48□□□□□ -2.01
SWM2YNR004W RAD52P06778 471 aaKnown RBP2.48□□□□□ -2.01
SWM2YNR004W SPS22P25380 463 aa2.48□□□□□ -2.01
SWM2YNR004W SPB1P25582 841 aaPredicted RBP2.48□□□□□ -2.01
SWM2YNR004W YCR051WP25631 222 aa2.48□□□□□ -2.01
SWM2YNR004W FUN19P28003 413 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms