RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C ACS1Q01574 713 aa4.76□□□□□ -1.65
CAF4YKR036C YML131WQ03102 365 aa4.76□□□□□ -1.65
CAF4YKR036C TIF35Q04067 274 aaKnown RBP4.76□□□□□ -1.65
CAF4YKR036C ENV7Q12003 364 aa4.76□□□□□ -1.65
CAF4YKR036C NSL1Q12143 216 aa4.76□□□□□ -1.65
CAF4YKR036C MDM32Q12171 622 aa4.76□□□□□ -1.65
CAF4YKR036C DGK1Q12382 290 aa4.76□□□□□ -1.65
CAF4YKR036C KCS1Q12494 1050 aa4.76□□□□□ -1.65
CAF4YKR036C LAG2Q92325 660 aa4.76□□□□□ -1.65
CAF4YKR036C RIF1P29539 1916 aa4.76□□□□□ -1.65
CAF4YKR036C FKS1P38631 1876 aaKnown RBP4.75□□□□□ -1.65
CAF4YKR036C RHO2P06781 192 aa4.75□□□□□ -1.65
CAF4YKR036C SEC53P07283 254 aaKnown RBP4.75□□□□□ -1.65
CAF4YKR036C SRD1P09007 221 aa4.75□□□□□ -1.65
CAF4YKR036C MER1P16523 270 aa4.75□□□□□ -1.65
CAF4YKR036C YCK1P23291 538 aa4.75□□□□□ -1.65
CAF4YKR036C ERG6P25087 383 aaKnown RBP4.75□□□□□ -1.65
CAF4YKR036C PPZ1P26570 692 aa4.75□□□□□ -1.65
CAF4YKR036C HYM1P32464 399 aa4.75□□□□□ -1.65
CAF4YKR036C SKG6P32900 734 aaPredicted RBP4.75□□□□□ -1.65
CAF4YKR036C HIS7P33734 552 aaKnown RBP4.75□□□□□ -1.65
CAF4YKR036C PXA2P34230 853 aa4.75□□□□□ -1.65
CAF4YKR036C ZRT3P34240 503 aa4.75□□□□□ -1.65
CAF4YKR036C YKL100CP34248 587 aa4.75□□□□□ -1.65
CAF4YKR036C ATG19P35193 415 aa4.75□□□□□ -1.65
CAF4YKR036C SEA4P38164 1038 aa4.75□□□□□ -1.65
CAF4YKR036C YHR202WP38887 602 aa4.75□□□□□ -1.65
CAF4YKR036C MLH1P38920 769 aa4.75□□□□□ -1.65
CAF4YKR036C DUN1P39009 513 aa4.75□□□□□ -1.65
CAF4YKR036C FLC2P39719 783 aa4.75□□□□□ -1.65
CAF4YKR036C TED1P40533 473 aa4.75□□□□□ -1.65
CAF4YKR036C MNT3P40549 630 aa4.75□□□□□ -1.65
CAF4YKR036C RTS2P40962 232 aa4.75□□□□□ -1.65
CAF4YKR036C QRI1P43123 477 aaKnown RBP4.75□□□□□ -1.65
CAF4YKR036C ALR2P43553 858 aa4.75□□□□□ -1.65
CAF4YKR036C VTC4P47075 721 aa4.75□□□□□ -1.65
CAF4YKR036C CPR7P47103 393 aa4.75□□□□□ -1.65
CAF4YKR036C ART5P53244 586 aaKnown RBP4.75□□□□□ -1.65
CAF4YKR036C NOP13P53883 403 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
CAF4YKR036C ARK1P53974 638 aa4.75□□□□□ -1.65
CAF4YKR036C YAT1P80235 687 aa4.75□□□□□ -1.65
CAF4YKR036C TRM82Q03774 444 aa4.75□□□□□ -1.65
CAF4YKR036C BUR2Q05949 395 aa4.75□□□□□ -1.65
CAF4YKR036C GRS2Q06817 618 aa4.75□□□□□ -1.65
CAF4YKR036C ESA1Q08649 445 aa4.75□□□□□ -1.65
CAF4YKR036C RAD7P06779 565 aa4.74□□□□□ -1.65
CAF4YKR036C INO1P11986 533 aa4.74□□□□□ -1.65
CAF4YKR036C CCA1P21269 546 aa4.74□□□□□ -1.65
CAF4YKR036C CIN8P27895 1000 aa4.74□□□□□ -1.65
CAF4YKR036C PHA2P32452 334 aa4.74□□□□□ -1.65
CAF4YKR036C CDS1P38221 457 aa4.74□□□□□ -1.65
CAF4YKR036C APM2P38700 605 aa4.74□□□□□ -1.65
CAF4YKR036C GIC1P38785 314 aa4.74□□□□□ -1.65
CAF4YKR036C BIG1P38813 335 aa4.74□□□□□ -1.65
CAF4YKR036C FAD1P38913 306 aa4.74□□□□□ -1.65
CAF4YKR036C SEN34P39707 275 aa4.74□□□□□ -1.65
CAF4YKR036C RBG1P39729 369 aa4.74□□□□□ -1.65
CAF4YKR036C SAW1P39735 261 aa4.74□□□□□ -1.65
CAF4YKR036C EMP65P40085 556 aa4.74□□□□□ -1.65
CAF4YKR036C MGS1P40151 587 aa4.74□□□□□ -1.65
CAF4YKR036C YFL012WP43580 148 aa4.74□□□□□ -1.65
CAF4YKR036C ROK1P45818 564 aaPredicted RBP4.74□□□□□ -1.65
CAF4YKR036C RAD17P48581 401 aa4.74□□□□□ -1.65
CAF4YKR036C ASN2P49090 572 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C PUS2P53167 370 aa4.74□□□□□ -1.65
CAF4YKR036C YGR026WP53217 278 aa4.74□□□□□ -1.65
CAF4YKR036C YNL010WP53981 241 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C GRX5Q02784 150 aa4.74□□□□□ -1.65
CAF4YKR036C DOT1Q04089 582 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C SIZ1Q04195 904 aa4.74□□□□□ -1.65
CAF4YKR036C TAF11Q04226 346 aa4.74□□□□□ -1.65
CAF4YKR036C MLH3Q12083 715 aa4.74□□□□□ -1.65
CAF4YKR036C CMR1Q12510 522 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C YMR030W-AQ3E760 96 aa4.74□□□□□ -1.65
CAF4YKR036C YOL159C-AQ3E769 90 aa4.74□□□□□ -1.65
CAF4YKR036C YBR085C-AO43137 85 aa4.74□□□□□ -1.65
CAF4YKR036C GPH1P06738 902 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C TCP1P12612 559 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C GCY1P14065 312 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
CAF4YKR036C ACO1P19414 778 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
CAF4YKR036C RNR1P21524 888 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C APA2P22108 325 aa4.74□□□□□ -1.65
CAF4YKR036C SLY1P22213 666 aa4.74□□□□□ -1.65
CAF4YKR036C TRX1P22217 103 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C COQ2P32378 372 aa4.74□□□□□ -1.65
CAF4YKR036C AFR1P33304 620 aa4.74□□□□□ -1.65
CAF4YKR036C SPC34P36131 295 aa4.74□□□□□ -1.65
CAF4YKR036C HRB1P38922 454 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
CAF4YKR036C SSO2P39926 295 aa4.74□□□□□ -1.65
CAF4YKR036C RPN3P40016 523 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C YER034WP40022 185 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C KHA1P40309 873 aa4.74□□□□□ -1.65
CAF4YKR036C IMA5P40884 581 aa4.74□□□□□ -1.65
CAF4YKR036C IMA1P53051 589 aa4.74□□□□□ -1.65
CAF4YKR036C GPD1Q00055 391 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C YPL071CQ02864 156 aa4.74□□□□□ -1.65
CAF4YKR036C EFR3Q03653 782 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C ENT5Q03769 411 aaKnown RBP4.74□□□□□ -1.65
CAF4YKR036C YMR155WQ03795 547 aa4.74□□□□□ -1.65
CAF4YKR036C CUR1Q06469 252 aa4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms