RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C MAF1P41910 395 aa5.36□□□□□ -1.55
VPS1YKR001C FET5P43561 622 aa5.36□□□□□ -1.55
VPS1YKR001C YGL204CP53089 101 aa5.36□□□□□ -1.55
VPS1YKR001C SHY1P53266 389 aa5.36□□□□□ -1.55
VPS1YKR001C YGR273CP53329 174 aa5.36□□□□□ -1.55
VPS1YKR001C YNL181WP53878 407 aa5.36□□□□□ -1.55
VPS1YKR001C CWC27Q02770 301 aa5.36□□□□□ -1.55
VPS1YKR001C CRR1Q05790 422 aa5.36□□□□□ -1.55
VPS1YKR001C FAR10Q06001 478 aa5.36□□□□□ -1.55
VPS1YKR001C MRI1Q06489 411 aaKnown RBP5.36□□□□□ -1.55
VPS1YKR001C FRE5Q08908 694 aa5.36□□□□□ -1.55
VPS1YKR001C ISA2Q12425 185 aa5.36□□□□□ -1.55
VPS1YKR001C RPL4AP10664 362 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C HOP1P20050 605 aa5.35□□□□□ -1.55
VPS1YKR001C HXT2P23585 541 aa5.35□□□□□ -1.55
VPS1YKR001C CLB2P24869 491 aa5.35□□□□□ -1.55
VPS1YKR001C RER1P25560 188 aa5.35□□□□□ -1.55
VPS1YKR001C GPI10P30777 616 aa5.35□□□□□ -1.55
VPS1YKR001C ATP11P32453 318 aa5.35□□□□□ -1.55
VPS1YKR001C PET127P32606 800 aa5.35□□□□□ -1.55
VPS1YKR001C GSP1P32835 219 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C GSP2P32836 220 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C CSE2P33308 149 aa5.35□□□□□ -1.55
VPS1YKR001C YBL055CP34220 418 aaPredicted RBP5.35□□□□□ -1.55
VPS1YKR001C CDS1P38221 457 aa5.35□□□□□ -1.55
VPS1YKR001C VMA13P41807 478 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C TRS85P46944 698 aa5.35□□□□□ -1.55
VPS1YKR001C NMD5P46970 1048 aa5.35□□□□□ -1.55
VPS1YKR001C YJR079WP47126 109 aa5.35□□□□□ -1.55
VPS1YKR001C JHD2P47156 728 aaPredicted RBP5.35□□□□□ -1.55
VPS1YKR001C RPL4BP49626 362 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C YDR476CQ03362 224 aa5.35□□□□□ -1.55
VPS1YKR001C YMR265CQ03508 461 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C RQC1Q05468 723 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C TGL5Q12043 749 aa5.35□□□□□ -1.55
VPS1YKR001C BEM2P39960 2167 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C RPP2AP05319 106 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C RNR2P09938 399 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C RPL35AP0CX84 120 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C RPL35BP0CX85 120 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C PET9P18239 318 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C PRI2P20457 528 aa5.35□□□□□ -1.55
VPS1YKR001C DBR1P24309 405 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C RSA4P25382 515 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C ADY2P25613 283 aa5.35□□□□□ -1.55
VPS1YKR001C PHO91P27514 894 aa5.35□□□□□ -1.55
VPS1YKR001C GCS1P35197 352 aa5.35□□□□□ -1.55
VPS1YKR001C ERR3P42222 437 aa5.35□□□□□ -1.55
VPS1YKR001C SLI1P53304 468 aa5.35□□□□□ -1.55
VPS1YKR001C YMR279CQ03263 540 aa5.35□□□□□ -1.55
VPS1YKR001C DOT1Q04089 582 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C RSF1Q05043 376 aa5.35□□□□□ -1.55
VPS1YKR001C COQ9Q05779 260 aa5.35□□□□□ -1.55
VPS1YKR001C HDA3Q06623 655 aa5.35□□□□□ -1.55
VPS1YKR001C RFU1Q08003 200 aa5.35□□□□□ -1.55
VPS1YKR001C TMA16Q08687 178 aa5.35□□□□□ -1.55
VPS1YKR001C YDL176WQ12027 708 aa5.35□□□□□ -1.55
VPS1YKR001C GET4Q12125 312 aa5.35□□□□□ -1.55
VPS1YKR001C FYV7Q12247 151 aa5.35□□□□□ -1.55
VPS1YKR001C ATG34Q12292 412 aa5.35□□□□□ -1.55
VPS1YKR001C PDH1Q12428 516 aaKnown RBP5.35□□□□□ -1.55
VPS1YKR001C LAA1P39526 2014 aa5.35□□□□□ -1.55
VPS1YKR001C CDC9P04819 755 aa5.34□□□□□ -1.55
VPS1YKR001C FUM1P08417 488 aaKnown RBP5.34□□□□□ -1.55
VPS1YKR001C NFT1P0CE68 1218 aa5.34□□□□□ -1.55
VPS1YKR001C ATP12P22135 325 aa5.34□□□□□ -1.55
VPS1YKR001C HCM1P25364 564 aa5.34□□□□□ -1.55
VPS1YKR001C PMT2P31382 759 aa5.34□□□□□ -1.55
VPS1YKR001C ACH1P32316 526 aa5.34□□□□□ -1.55
VPS1YKR001C DAL3P32459 195 aa5.34□□□□□ -1.55
VPS1YKR001C CDC13P32797 924 aaKnown RBP5.34□□□□□ -1.55
VPS1YKR001C LIP5P32875 414 aa5.34□□□□□ -1.55
VPS1YKR001C SPO23P33757 523 aa5.34□□□□□ -1.55
VPS1YKR001C PPS1P38148 807 aa5.34□□□□□ -1.55
VPS1YKR001C RPN3P40016 523 aaKnown RBP5.34□□□□□ -1.55
VPS1YKR001C SER33P40510 469 aa5.34□□□□□ -1.55
VPS1YKR001C FIS1P40515 155 aa5.34□□□□□ -1.55
VPS1YKR001C TFG2P41896 400 aaPredicted RBP5.34□□□□□ -1.55
VPS1YKR001C CSN12P47130 423 aa5.34□□□□□ -1.55
VPS1YKR001C DIA1P54005 336 aa5.34□□□□□ -1.55
VPS1YKR001C UGO1Q03327 502 aa5.34□□□□□ -1.55
VPS1YKR001C YDR249CQ03787 373 aa5.34□□□□□ -1.55
VPS1YKR001C AIM33Q04516 312 aa5.34□□□□□ -1.55
VPS1YKR001C ARG7Q04728 441 aa5.34□□□□□ -1.55
VPS1YKR001C MFB1Q04922 465 aa5.34□□□□□ -1.55
VPS1YKR001C CDA2Q06703 312 aa5.34□□□□□ -1.55
VPS1YKR001C TRE1Q08919 783 aa5.34□□□□□ -1.55
VPS1YKR001C YOR022CQ12204 715 aa5.34□□□□□ -1.55
VPS1YKR001C ISN1Q99312 450 aa5.34□□□□□ -1.55
VPS1YKR001C ILV1P00927 576 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C IFM1P25038 676 aa5.33□□□□□ -1.56
VPS1YKR001C RRT12P25381 491 aa5.33□□□□□ -1.56
VPS1YKR001C CAM1P29547 415 aaKnown RBP5.33□□□□□ -1.56
VPS1YKR001C SRP102P36057 244 aaPredicted RBP5.33□□□□□ -1.56
VPS1YKR001C PTC7P38797 343 aa5.33□□□□□ -1.56
VPS1YKR001C AKR1P39010 764 aa5.33□□□□□ -1.56
VPS1YKR001C GAA1P39012 614 aa5.33□□□□□ -1.56
VPS1YKR001C ACO2P39533 789 aa5.33□□□□□ -1.56
VPS1YKR001C RMD8P43620 662 aa5.33□□□□□ -1.56
VPS1YKR001C PAC10P48363 199 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms