RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C SEC15P22224 910 aa3.44□□□□□ -1.86
VPS53YJL029C MKK2P32491 506 aa3.44□□□□□ -1.86
VPS53YJL029C RMA1P36001 430 aaKnown RBP3.44□□□□□ -1.86
VPS53YJL029C KKQ8P36004 724 aa3.44□□□□□ -1.86
VPS53YJL029C OAF1P39720 1047 aaPredicted RBP3.44□□□□□ -1.86
VPS53YJL029C FRT2P39734 528 aa3.44□□□□□ -1.86
VPS53YJL029C YIL086CP40503 102 aa3.44□□□□□ -1.86
VPS53YJL029C SPG5P42933 373 aa3.44□□□□□ -1.86
VPS53YJL029C MIC19P43594 170 aa3.44□□□□□ -1.86
VPS53YJL029C YJR030CP47101 745 aa3.44□□□□□ -1.86
VPS53YJL029C ZIP2P53061 704 aa3.44□□□□□ -1.86
VPS53YJL029C YNL260CP53846 198 aa3.44□□□□□ -1.86
VPS53YJL029C IBD2P53892 351 aa3.44□□□□□ -1.86
VPS53YJL029C UBX4P54730 416 aa3.44□□□□□ -1.86
VPS53YJL029C RNT1Q02555 471 aa3.44□□□□□ -1.86
VPS53YJL029C GOT1Q03554 138 aa3.44□□□□□ -1.86
VPS53YJL029C DFG5Q05031 458 aa3.44□□□□□ -1.86
VPS53YJL029C RSF1Q05043 376 aa3.44□□□□□ -1.86
VPS53YJL029C ATG34Q12292 412 aa3.44□□□□□ -1.86
VPS53YJL029C PST1Q12355 444 aa3.44□□□□□ -1.86
VPS53YJL029C YMR030W-AQ3E760 96 aa3.44□□□□□ -1.86
VPS53YJL029C PRP6P19735 899 aaPredicted RBP3.43□□□□□ -1.86
VPS53YJL029C SEC62P21825 274 aa3.43□□□□□ -1.86
VPS53YJL029C MSN1P22148 382 aa3.43□□□□□ -1.86
VPS53YJL029C CMK1P27466 446 aaKnown RBP3.43□□□□□ -1.86
VPS53YJL029C SFA1P32771 386 aa3.43□□□□□ -1.86
VPS53YJL029C MUD2P36084 527 aaKnown RBP3.43□□□□□ -1.86
VPS53YJL029C YKL069WP36088 180 aa3.43□□□□□ -1.86
VPS53YJL029C DLD3P39976 496 aaKnown RBP3.43□□□□□ -1.86
VPS53YJL029C PIC2P40035 300 aa3.43□□□□□ -1.86
VPS53YJL029C NTA1P40354 457 aa3.43□□□□□ -1.86
VPS53YJL029C HOS4P40480 1083 aa3.43□□□□□ -1.86
VPS53YJL029C AXL1P40851 1208 aa3.43□□□□□ -1.86
VPS53YJL029C LIA1P47120 325 aaKnown RBP3.43□□□□□ -1.86
VPS53YJL029C NAS6P50086 228 aa3.43□□□□□ -1.86
VPS53YJL029C SAM37P50110 327 aa3.43□□□□□ -1.86
VPS53YJL029C EFM5P53200 248 aaKnown RBP3.43□□□□□ -1.86
VPS53YJL029C SLM2P53955 656 aa3.43□□□□□ -1.86
VPS53YJL029C GIP3Q03016 1276 aa3.43□□□□□ -1.86
VPS53YJL029C GAD1Q04792 585 aa3.43□□□□□ -1.86
VPS53YJL029C ROY1Q04847 553 aa3.43□□□□□ -1.86
VPS53YJL029C BSC2Q05611 235 aa3.43□□□□□ -1.86
VPS53YJL029C YOR114WQ12219 294 aa3.43□□□□□ -1.86
VPS53YJL029C FRE7Q12333 620 aa3.43□□□□□ -1.86
VPS53YJL029C NMT1P14743 455 aa3.43□□□□□ -1.86
VPS53YJL029C TYR1P20049 452 aa3.43□□□□□ -1.86
VPS53YJL029C YCR006CP25350 157 aa3.43□□□□□ -1.86
VPS53YJL029C YJU2P28320 278 aaPredicted RBP3.43□□□□□ -1.86
VPS53YJL029C COX13P32799 129 aa3.43□□□□□ -1.86
VPS53YJL029C PTM1P32857 523 aa3.43□□□□□ -1.86
VPS53YJL029C UGP1P32861 499 aaKnown RBP3.43□□□□□ -1.86
VPS53YJL029C CBF5P33322 483 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
VPS53YJL029C ASC1P38011 319 aaKnown RBP3.43□□□□□ -1.86
VPS53YJL029C PEP8P40335 379 aa3.43□□□□□ -1.86
VPS53YJL029C COA1P40452 197 aa3.43□□□□□ -1.86
VPS53YJL029C STB2P46679 850 aa3.43□□□□□ -1.86
VPS53YJL029C URB2P47108 1174 aa3.43□□□□□ -1.86
VPS53YJL029C YJR098CP47139 656 aa3.43□□□□□ -1.86
VPS53YJL029C SED5Q01590 340 aa3.43□□□□□ -1.86
VPS53YJL029C RRB1Q04225 511 aaKnown RBP3.43□□□□□ -1.86
VPS53YJL029C SEC10Q06245 871 aa3.43□□□□□ -1.86
VPS53YJL029C UBX3Q12229 455 aa3.43□□□□□ -1.86
VPS53YJL029C TY1A-BLQ12266 440 aa3.43□□□□□ -1.86
VPS53YJL029C YVC1Q12324 675 aa3.43□□□□□ -1.86
VPS53YJL029C YLR111WQ12528 110 aa3.43□□□□□ -1.86
VPS53YJL029C CDC21P06785 304 aa3.42□□□□□ -1.86
VPS53YJL029C BCY1P07278 416 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C CDC34P14682 295 aa3.42□□□□□ -1.86
VPS53YJL029C CDC26P14724 124 aa3.42□□□□□ -1.86
VPS53YJL029C PRE9P23638 258 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C PRO1P32264 428 aa3.42□□□□□ -1.86
VPS53YJL029C MEI5P32489 222 aa3.42□□□□□ -1.86
VPS53YJL029C FTH1P38310 465 aa3.42□□□□□ -1.86
VPS53YJL029C INM1P38710 295 aa3.42□□□□□ -1.86
VPS53YJL029C PTI1P39927 425 aaPredicted RBP3.42□□□□□ -1.86
VPS53YJL029C MAD2P40958 196 aa3.42□□□□□ -1.86
VPS53YJL029C PSA1P41940 361 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C ERG13P54839 491 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C YML131WQ03102 365 aa3.42□□□□□ -1.86
VPS53YJL029C YOL073CQ08232 322 aa3.42□□□□□ -1.86
VPS53YJL029C YDR056CQ12025 205 aa3.42□□□□□ -1.86
VPS53YJL029C NMD4Q12129 218 aa3.42□□□□□ -1.86
VPS53YJL029C HAL9Q12180 1030 aa3.42□□□□□ -1.86
VPS53YJL029C GPR1Q12361 961 aa3.42□□□□□ -1.86
VPS53YJL029C YCL012CQ8J0M4 134 aa3.42□□□□□ -1.86
VPS53YJL029C FLP1P03870 423 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-LR1P0C2J4 438 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-FP0CX61 438 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-GR2P0CX62 438 aa3.42□□□□□ -1.86
VPS53YJL029C DAT1P13483 248 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C HOP1P20050 605 aa3.42□□□□□ -1.86
VPS53YJL029C BAS1P22035 811 aa3.42□□□□□ -1.86
VPS53YJL029C SEC14P24280 304 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C TY2A-CP25383 438 aa3.42□□□□□ -1.86
VPS53YJL029C AAD3P25612 363 aa3.42□□□□□ -1.86
VPS53YJL029C MVD1P32377 396 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C HXT4P32467 576 aa3.42□□□□□ -1.86
VPS53YJL029C KAP122P32767 1081 aa3.42□□□□□ -1.86
VPS53YJL029C PPG1P32838 368 aa3.42□□□□□ -1.86
VPS53YJL029C OAR1P35731 278 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms