RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeast

Gene PXR1, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXR1	YGR280C	PRS1	P32895	427 aa	Known RBP	4.05	□□□□□ -1.76
PXR1	YGR280C	ALG3	P38179	458 aa		4.05	□□□□□ -1.76
PXR1	YGR280C	FMP52	P40008	231 aa		4.05	□□□□□ -1.76
PXR1	YGR280C	NEO1	P40527	1151 aa		4.05	□□□□□ -1.76
PXR1	YGR280C	YGR237C	P50089	785 aa		4.05	□□□□□ -1.76
PXR1	YGR280C	RPN9	Q04062	393 aa	Known RBP	4.05	□□□□□ -1.76
PXR1	YGR280C	TDA9	Q04545	1251 aa		4.05	□□□□□ -1.76
PXR1	YGR280C	YDR222W	Q04925	415 aa		4.05	□□□□□ -1.76
PXR1	YGR280C	MMT2	Q08970	484 aa		4.05	□□□□□ -1.76
PXR1	YGR280C	FLO9	P39712	1322 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	CDC36	P06100	191 aa	Predicted RBP	4.04	□□□□□ -1.76
PXR1	YGR280C	RPB2	P08518	1224 aa	Known RBP	4.04	□□□□□ -1.76
PXR1	YGR280C	YFR010W-A	P0C5N0	62 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	SEC23	P15303	768 aa	Known RBP	4.04	□□□□□ -1.76
PXR1	YGR280C	ERG8	P24521	451 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	MGR1	P25573	417 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	HEM3	P28789	327 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	MEI4	P29467	408 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	PRS3	P38689	320 aa	Known RBP	4.04	□□□□□ -1.76
PXR1	YGR280C	BCD1	P38772	366 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	YHR127W	P38833	243 aa	Known RBP	4.04	□□□□□ -1.76
PXR1	YGR280C	CCT5	P40413	562 aa	Known RBP	4.04	□□□□□ -1.76
PXR1	YGR280C	ICE2	P40499	491 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	PRM2	P40534	656 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	AIP1	P46680	615 aa	Known RBP	4.04	□□□□□ -1.76
PXR1	YGR280C	YJR039W	P47107	1121 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	BIO3	P50277	480 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	YGR111W	P53265	400 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	GND2	P53319	492 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	MPS1	P54199	764 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	TAF12	Q03761	539 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	ROY1	Q04847	553 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	YPR078C	Q06813	372 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	ADY3	Q07732	790 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	XYL2	Q07993	356 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	AFT2	Q08957	416 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	Q0144	Q9ZZW2	109 aa		4.04	□□□□□ -1.76
PXR1	YGR280C	FLP1	P03870	423 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	HXK2	P04807	486 aa	Known RBP	4.03	□□□□□ -1.76
PXR1	YGR280C	PHO4	P07270	312 aa	Known RBP	4.03	□□□□□ -1.76
PXR1	YGR280C	PCT1	P13259	424 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	TAH1	P25638	111 aa	Predicted RBP	4.03	□□□□□ -1.76
PXR1	YGR280C	ADE1	P27616	306 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	TPS2	P31688	896 aa	Known RBP	4.03	□□□□□ -1.76
PXR1	YGR280C	YMC1	P32331	307 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	NDI1	P32340	513 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	YPT52	P36018	234 aa	Known RBP	4.03	□□□□□ -1.76
PXR1	YGR280C	PCH2	P38126	564 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	RFT1	P38206	574 aa	Predicted RBP	4.03	□□□□□ -1.76
PXR1	YGR280C	YBR062C	P38239	180 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	YHR112C	P38716	378 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	MET30	P39014	640 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	YER188W	P40103	239 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	MNN5	P46982	586 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	UBX4	P54730	416 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	AAT1	Q01802	451 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	SKI8	Q02793	397 aa	Predicted RBP	4.03	□□□□□ -1.76
PXR1	YGR280C	OAZ1	Q02803	292 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	YMR210W	Q03649	449 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	GIS1	Q03833	894 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	YLR040C	Q07988	224 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	REX3	Q12090	404 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	YPR022C	Q12139	1133 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	GLO4	Q12320	285 aa		4.03	□□□□□ -1.76
PXR1	YGR280C	RPL15A	P05748	204 aa	Known RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	CDC37	P06101	506 aa	Known RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	MET2	P08465	486 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	PRB1	P09232	635 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	PRP16	P15938	1071 aa	Predicted RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	YCL049C	P25577	312 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	RPB9	P27999	122 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	RAD5	P32849	1169 aa	Predicted RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	APT2	P36973	181 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	RRN10	P38204	145 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	BZZ1	P38822	633 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	PRP39	P39682	629 aa	Known RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	SEC27	P41811	889 aa	Known RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	GDS1	P41913	522 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	QRI1	P43123	477 aa	Known RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	EMC2	P47133	292 aa	Known RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	MAL11	P53048	616 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	BUD9	P53226	547 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	RPL15B	P54780	204 aa	Predicted RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	MET14	Q02196	202 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	EBS1	Q03466	884 aa	Known RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	CGI121	Q03705	181 aa	Known RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	MIX14	Q04341	121 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	YMR034C	Q05131	434 aa	Predicted RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	BOP2	Q06150	570 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	PML1	Q07930	204 aa	Predicted RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	NRT1	Q08485	598 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	SOG2	Q08817	791 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	SLP1	Q12232	587 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	LDB17	Q12342	491 aa		4.02	□□□□□ -1.77
PXR1	YGR280C	PRP46	Q12417	451 aa	Predicted RBP	4.02	□□□□□ -1.77
PXR1	YGR280C	RPL22A	P05749	121 aa	Known RBP	4.01	□□□□□ -1.77
PXR1	YGR280C	SAC7	P17121	654 aa		4.01	□□□□□ -1.77
PXR1	YGR280C	NPR1	P22211	790 aa		4.01	□□□□□ -1.77
PXR1	YGR280C	ARG1	P22768	420 aa		4.01	□□□□□ -1.77
PXR1	YGR280C	YCK1	P23291	538 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms